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A mathematical model for the branched chain amino acid biosynthetic pathways of Escherichia coli K12.
Yang CR, Shapiro BE, Hung SP, Mjolsness ED, Hatfield GW. Yang CR, et al. Among authors: shapiro be. J Biol Chem. 2005 Mar 25;280(12):11224-32. doi: 10.1074/jbc.M411471200. Epub 2005 Jan 18. J Biol Chem. 2005. PMID: 15657047 Free article.
This has been accomplished with the use of kMech (Yang, C.-R., Shapiro, B. E., Mjolsness, E. D., and Hatfield, G. W. (2005) Bioinformatics 21, in press), a Cellerator (Shapiro, B. ...These ordinary differential equations are numerically solved by Mathematica. Any me …
This has been accomplished with the use of kMech (Yang, C.-R., Shapiro, B. E., Mjolsness, E. D., and Hatfield, G. W. (2005) Bioinform …
A Pycellerator Tutorial.
Shapiro BE, Mjolsness E. Shapiro BE, et al. Methods Mol Biol. 2019;1945:1-32. doi: 10.1007/978-1-4939-9102-0_1. Methods Mol Biol. 2019. PMID: 30945240
The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models.
Hucka M, Finney A, Sauro HM, Bolouri H, Doyle JC, Kitano H, Arkin AP, Bornstein BJ, Bray D, Cornish-Bowden A, Cuellar AA, Dronov S, Gilles ED, Ginkel M, Gor V, Goryanin II, Hedley WJ, Hodgman TC, Hofmeyr JH, Hunter PJ, Juty NS, Kasberger JL, Kremling A, Kummer U, Le Novère N, Loew LM, Lucio D, Mendes P, Minch E, Mjolsness ED, Nakayama Y, Nelson MR, Nielsen PF, Sakurada T, Schaff JC, Shapiro BE, Shimizu TS, Spence HD, Stelling J, Takahashi K, Tomita M, Wagner J, Wang J; SBML Forum. Hucka M, et al. Among authors: shapiro be. Bioinformatics. 2003 Mar 1;19(4):524-31. doi: 10.1093/bioinformatics/btg015. Bioinformatics. 2003. PMID: 12611808
68 results