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Reinspection of a Clinical Proteomics Tumor Analysis Consortium (CPTAC) Dataset with Cloud Computing Reveals Abundant Post-Translational Modifications and Protein Sequence Variants.
Prakash A, Taylor L, Varkey M, Hoxie N, Mohammed Y, Goo YA, Peterman S, Moghekar A, Yuan Y, Glaros T, Steele JR, Faridi P, Parihari S, Srivastava S, Otto JJ, Nyalwidhe JO, Semmes OJ, Moran MF, Madugundu A, Mun DG, Pandey A, Mahoney KE, Shabanowitz J, Saxena S, Orsburn BC. Prakash A, et al. Among authors: srivastava s. Cancers (Basel). 2021 Oct 9;13(20):5034. doi: 10.3390/cancers13205034. Cancers (Basel). 2021. PMID: 34680183 Free PMC article.
A large-scale targeted proteomics of serum and tissue shows the utility of classifying high grade and low grade meningioma tumors.
Halder A, Biswas D, Chauhan A, Saha A, Auromahima S, Yadav D, Nissa MU, Iyer G, Parihari S, Sharma G, Epari S, Shetty P, Moiyadi A, Ball GR, Srivastava S. Halder A, et al. Among authors: srivastava s. Clin Proteomics. 2023 Sep 29;20(1):41. doi: 10.1186/s12014-023-09426-9. Clin Proteomics. 2023. PMID: 37770851 Free PMC article.
A proteogenomic approach to target neoantigens in solid tumors.
Verma A, Halder A, Marathe S, Purwar R, Srivastava S. Verma A, et al. Among authors: srivastava s. Expert Rev Proteomics. 2020 Nov-Dec;17(11-12):797-812. doi: 10.1080/14789450.2020.1881889. Expert Rev Proteomics. 2020. PMID: 33491499 Review.
6,127 results