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RNAmmer: consistent and rapid annotation of ribosomal RNA genes.
Lagesen K, Hallin P, Rødland EA, Staerfeldt HH, Rognes T, Ussery DW. Lagesen K, et al. Among authors: staerfeldt hh. Nucleic Acids Res. 2007;35(9):3100-8. doi: 10.1093/nar/gkm160. Epub 2007 Apr 22. Nucleic Acids Res. 2007. PMID: 17452365 Free PMC article.
A DNA structural atlas for Escherichia coli.
Pedersen AG, Jensen LJ, Brunak S, Staerfeldt HH, Ussery DW. Pedersen AG, et al. Among authors: staerfeldt hh. J Mol Biol. 2000 Jun 16;299(4):907-30. doi: 10.1006/jmbi.2000.3787. J Mol Biol. 2000. PMID: 10843847
Genome Update: proteome comparisons.
Binnewies TT, Hallin PF, Stærfeldt HH, Ussery DW. Binnewies TT, et al. Among authors: staerfeldt hh. Microbiology (Reading). 2005 Jan;151(Pt 1):1-4. doi: 10.1099/mic.0.27760-0. Microbiology (Reading). 2005. PMID: 15632419 Free article. No abstract available.
Origin of replication in circular prokaryotic chromosomes.
Worning P, Jensen LJ, Hallin PF, Staerfeldt HH, Ussery DW. Worning P, et al. Among authors: staerfeldt hh. Environ Microbiol. 2006 Feb;8(2):353-61. doi: 10.1111/j.1462-2920.2005.00917.x. Environ Microbiol. 2006. PMID: 16423021
Bias of purine stretches in sequenced chromosomes.
Ussery D, Soumpasis DM, Brunak S, Staerfeldt HH, Worning P, Krogh A. Ussery D, et al. Among authors: staerfeldt hh. Comput Chem. 2002 Jul;26(5):531-41. doi: 10.1016/s0097-8485(02)00013-x. Comput Chem. 2002. PMID: 12144181
MatrixPlot: visualizing sequence constraints.
Gorodkin J, Staerfeldt HH, Lund O, Brunak S. Gorodkin J, et al. Among authors: staerfeldt hh. Bioinformatics. 1999 Sep;15(9):769-70. doi: 10.1093/bioinformatics/15.9.769. Bioinformatics. 1999. PMID: 10498780
21 results