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The Genomic HyperBrowser: inferential genomics at the sequence level.
Genome Biol. 2010;11(12):R121. doi: 10.1186/gb-2010-11-12-r121. Epub 2010 Dec 23.
Genome Biol. 2010.
PMID: 21182759
Free PMC article.
The differential disease regulome.
Sandve GK, Gundersen S, Rydbeck H, Glad IK, Holden L, Holden M, Liestøl K, Clancy T, Drabløs F, Ferkingstad E, Johansen M, Nygaard V, Tøstesen E, Frigessi A, Hovig E.
Sandve GK, et al. Among authors: tostesen e.
BMC Genomics. 2011 Jul 7;12:353. doi: 10.1186/1471-2164-12-353.
BMC Genomics. 2011.
PMID: 21736759
Free PMC article.
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Speed-up of DNA melting algorithm with complete nearest neighbor properties.
Tøstesen E, Liu F, Jenssen TK, Hovig E.
Tøstesen E, et al.
Biopolymers. 2003 Oct;70(3):364-76. doi: 10.1002/bip.10495.
Biopolymers. 2003.
PMID: 14579309
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Stitchprofiles.uio.no: analysis of partly melted DNA conformations using stitch profiles.
Tøstesen E, Jerstad GI, Hovig E.
Tøstesen E, et al.
Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W573-6. doi: 10.1093/nar/gki424.
Nucleic Acids Res. 2005.
PMID: 15980539
Free PMC article.
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The human genomic melting map.
Liu F, Tøstesen E, Sundet JK, Jenssen TK, Bock C, Jerstad GI, Thilly WG, Hovig E.
Liu F, et al. Among authors: tostesen e.
PLoS Comput Biol. 2007 May;3(5):e93. doi: 10.1371/journal.pcbi.0030093. Epub 2007 Apr 11.
PLoS Comput Biol. 2007.
PMID: 17511513
Free PMC article.
Item in Clipboard
Segmentation of DNA sequences into twostate regions and melting fork regions.
Tøstesen E, Sandve GK, Liu F, Hovig E.
Tøstesen E, et al.
J Phys Condens Matter. 2009 Jan 21;21(3):034109. doi: 10.1088/0953-8984/21/3/034109. Epub 2008 Dec 17.
J Phys Condens Matter. 2009.
PMID: 21817254
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A stitch in time: efficient computation of genomic DNA melting bubbles.
Tøstesen E.
Tøstesen E.
Algorithms Mol Biol. 2008 Jul 17;3:10. doi: 10.1186/1748-7188-3-10.
Algorithms Mol Biol. 2008.
PMID: 18637171
Free PMC article.
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Partly melted DNA conformations obtained with a probability peak finding method.
Tøstesen E.
Tøstesen E.
Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Jun;71(6 Pt 1):061922. doi: 10.1103/PhysRevE.71.061922. Epub 2005 Jun 28.
Phys Rev E Stat Nonlin Soft Matter Phys. 2005.
PMID: 16089780
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