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Cassis: detection of genomic rearrangement breakpoints.
Baudet C, Lemaitre C, Dias Z, Gautier C, Tannier E, Sagot MF. Baudet C, et al. Among authors: tannier e. Bioinformatics. 2010 Aug 1;26(15):1897-8. doi: 10.1093/bioinformatics/btq301. Epub 2010 Jun 23. Bioinformatics. 2010. PMID: 20576622 Free PMC article.
Lateral gene transfer as a support for the tree of life.
Abby SS, Tannier E, Gouy M, Daubin V. Abby SS, et al. Among authors: tannier e. Proc Natl Acad Sci U S A. 2012 Mar 27;109(13):4962-7. doi: 10.1073/pnas.1116871109. Epub 2012 Mar 13. Proc Natl Acad Sci U S A. 2012. PMID: 22416123 Free PMC article.
Evolution of gene neighborhoods within reconciled phylogenies.
Bérard S, Gallien C, Boussau B, Szöllősi GJ, Daubin V, Tannier E. Bérard S, et al. Among authors: tannier e. Bioinformatics. 2012 Sep 15;28(18):i382-i388. doi: 10.1093/bioinformatics/bts374. Bioinformatics. 2012. PMID: 22962456 Free PMC article.
Genome-scale coestimation of species and gene trees.
Boussau B, Szöllosi GJ, Duret L, Gouy M, Tannier E, Daubin V. Boussau B, et al. Among authors: tannier e. Genome Res. 2013 Feb;23(2):323-30. doi: 10.1101/gr.141978.112. Epub 2012 Nov 6. Genome Res. 2013. PMID: 23132911 Free PMC article.
Lateral gene transfer from the dead.
Szöllosi GJ, Tannier E, Lartillot N, Daubin V. Szöllosi GJ, et al. Among authors: tannier e. Syst Biol. 2013 May 1;62(3):386-97. doi: 10.1093/sysbio/syt003. Epub 2013 Jan 25. Syst Biol. 2013. PMID: 23355531 Free PMC article.
Efficient exploration of the space of reconciled gene trees.
Szöllõsi GJ, Rosikiewicz W, Boussau B, Tannier E, Daubin V. Szöllõsi GJ, et al. Among authors: tannier e. Syst Biol. 2013 Nov;62(6):901-12. doi: 10.1093/sysbio/syt054. Epub 2013 Aug 6. Syst Biol. 2013. PMID: 23925510 Free PMC article.
FPSAC: fast phylogenetic scaffolding of ancient contigs.
Rajaraman A, Tannier E, Chauve C. Rajaraman A, et al. Among authors: tannier e. Bioinformatics. 2013 Dec 1;29(23):2987-94. doi: 10.1093/bioinformatics/btt527. Epub 2013 Sep 24. Bioinformatics. 2013. PMID: 24068034
Lateral gene transfer, rearrangement, reconciliation.
Patterson M, Szöllősi G, Daubin V, Tannier E. Patterson M, et al. Among authors: tannier e. BMC Bioinformatics. 2013;14 Suppl 15(Suppl 15):S4. doi: 10.1186/1471-2105-14-S15-S4. Epub 2013 Oct 15. BMC Bioinformatics. 2013. PMID: 24564205 Free PMC article.
59 results