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Orchestrating high-throughput genomic analysis with Bioconductor.
Huber W, Carey VJ, Gentleman R, Anders S, Carlson M, Carvalho BS, Bravo HC, Davis S, Gatto L, Girke T, Gottardo R, Hahne F, Hansen KD, Irizarry RA, Lawrence M, Love MI, MacDonald J, Obenchain V, Oleś AK, Pagès H, Reyes A, Shannon P, Smyth GK, Tenenbaum D, Waldron L, Morgan M. Huber W, et al. Among authors: tenenbaum d. Nat Methods. 2015 Feb;12(2):115-21. doi: 10.1038/nmeth.3252. Nat Methods. 2015. PMID: 25633503 Free PMC article. Review.
Visualization of omics data for systems biology.
Gehlenborg N, O'Donoghue SI, Baliga NS, Goesmann A, Hibbs MA, Kitano H, Kohlbacher O, Neuweger H, Schneider R, Tenenbaum D, Gavin AC. Gehlenborg N, et al. Among authors: tenenbaum d. Nat Methods. 2010 Mar;7(3 Suppl):S56-68. doi: 10.1038/nmeth.1436. Nat Methods. 2010. PMID: 20195258 Review.
Parallel evolution of transcriptome architecture during genome reorganization.
Yoon SH, Reiss DJ, Bare JC, Tenenbaum D, Pan M, Slagel J, Moritz RL, Lim S, Hackett M, Menon AL, Adams MW, Barnebey A, Yannone SM, Leigh JA, Baliga NS. Yoon SH, et al. Among authors: tenenbaum d. Genome Res. 2011 Nov;21(11):1892-904. doi: 10.1101/gr.122218.111. Epub 2011 Jul 12. Genome Res. 2011. PMID: 21750103 Free PMC article.
Inherited Chromosomally Integrated Human Herpesvirus 6 Demonstrates Tissue-Specific RNA Expression In Vivo That Correlates with an Increased Antibody Immune Response.
Peddu V, Dubuc I, Gravel A, Xie H, Huang ML, Tenenbaum D, Jerome KR, Tardif JC, Dubé MP, Flamand L, Greninger AL. Peddu V, et al. Among authors: tenenbaum d. J Virol. 2019 Dec 12;94(1):e01418-19. doi: 10.1128/JVI.01418-19. Print 2019 Dec 12. J Virol. 2019. PMID: 31597766 Free PMC article.
Recycling of bacterial RNA polymerase by the Swi2/Snf2 ATPase RapA.
Inlow K, Tenenbaum D, Friedman LJ, Kondev J, Gelles J. Inlow K, et al. Among authors: tenenbaum d. Proc Natl Acad Sci U S A. 2023 Jul 11;120(28):e2303849120. doi: 10.1073/pnas.2303849120. Epub 2023 Jul 5. Proc Natl Acad Sci U S A. 2023. PMID: 37406096 Free PMC article.
Recycling of Bacterial RNA Polymerase by the Swi2/Snf2 ATPase RapA.
Inlow K, Tenenbaum D, Friedman LJ, Kondev J, Gelles J. Inlow K, et al. Among authors: tenenbaum d. bioRxiv [Preprint]. 2023 Mar 24:2023.03.22.533849. doi: 10.1101/2023.03.22.533849. bioRxiv. 2023. PMID: 36993374 Free PMC article. Updated. Preprint.
85 results