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Evaluating the analytical validity of circulating tumor DNA sequencing assays for precision oncology.
Nat Biotechnol. 2021 Sep;39(9):1115-1128. doi: 10.1038/s41587-021-00857-z. Epub 2021 Apr 12.
Nat Biotechnol. 2021.
PMID: 33846644
Free PMC article.
Cross-oncopanel study reveals high sensitivity and accuracy with overall analytical performance depending on genomic regions.
Gong B, Li D, Kusko R, Novoradovskaya N, Zhang Y, Wang S, Pabón-Peña C, Zhang Z, Lai K, Cai W, LoCoco JS, Lader E, Richmond TA, Mittal VK, Liu LC, Johann DJ Jr, Willey JC, Bushel PR, Yu Y, Xu C, Chen G, Burgess D, Cawley S, Giorda K, Haseley N, Qiu F, Wilkins K, Arib H, Attwooll C, Babson K, Bao L, Bao W, Lucas AB, Best H, Bhandari A, Bisgin H, Blackburn J, Blomquist TM, Boardman L, Burgher B, Butler DJ, Chang CJ, Chaubey A, Chen T, Chierici M, Chin CR, Close D, Conroy J, Cooley Coleman J, Craig DJ, Crawford E, Del Pozo A, Deveson IW, Duncan D, Eterovic AK, Fan X, Foox J, Furlanello C, Ghosal A, Glenn S, Guan M, Haag C, Hang X, Happe S, Hennigan B, Hipp J, Hong H, Horvath K, Hu J, Hung LY, Jarosz M, Kerkhof J, Kipp B, Kreil DP, Łabaj P, Lapunzina P, Li P, Li QZ, Li W, Li Z, Liang Y, Liu S, Liu Z, Ma C, Marella N, Martín-Arenas R, Megherbi DB, Meng Q, Mieczkowski PA, Morrison T, Muzny D, Ning B, Parsons BL, Paweletz CP, Pirooznia M, Qu W, Raymond A, Rindler P, Ringler R, Sadikovic B, Scherer A, Schulze E, Sebra R, Shaknovich R, Shi Q, Shi T, Silla-Castro JC, Smith M, López MS, Song P, Stetson D, Strahl M, Stuart A, Supplee J, Szankasi P, Tan H, Tang LY, Tao Y, Thakkar S, Thierry-Mi…
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Gong B, et al. Among authors: thodima vj.
Genome Biol. 2021 Apr 16;22(1):109. doi: 10.1186/s13059-021-02315-0.
Genome Biol. 2021.
PMID: 33863344
Free PMC article.
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Neutrophil chemokines secreted by tumor cells mount a lung antimetastatic response during renal cell carcinoma progression.
López-Lago MA, Posner S, Thodima VJ, Molina AM, Motzer RJ, Chaganti RS.
López-Lago MA, et al. Among authors: thodima vj.
Oncogene. 2013 Apr 4;32(14):1752-60. doi: 10.1038/onc.2012.201. Epub 2012 Jun 4.
Oncogene. 2013.
PMID: 22665059
Free PMC article.
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Genomic deregulation during metastasis of renal cell carcinoma implements a myofibroblast-like program of gene expression.
López-Lago MA, Thodima VJ, Guttapalli A, Chan T, Heguy A, Molina AM, Reuter VE, Motzer RJ, Chaganti RS.
López-Lago MA, et al. Among authors: thodima vj.
Cancer Res. 2010 Dec 1;70(23):9682-92. doi: 10.1158/0008-5472.CAN-10-2279. Epub 2010 Oct 15.
Cancer Res. 2010.
PMID: 20952505
Free PMC article.
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