Tsujii J - Search Results

1

Accelerating the annotation of sparse named entities by dynamic sentence selection.

Tsuruoka Y, Tsujii J, Ananiadou S. Tsuruoka Y, et al. Among authors: tsujii j. BMC Bioinformatics. 2008 Nov 19;9 Suppl 11(Suppl 11):S8. doi: 10.1186/1471-2105-9-S11-S8. BMC Bioinformatics. 2008. PMID: 19025694 Free PMC article.

2

Learning string similarity measures for gene/protein name dictionary look-up using logistic regression.

Tsuruoka Y, McNaught J, Tsujii J, Ananiadou S. Tsuruoka Y, et al. Among authors: tsujii j. Bioinformatics. 2007 Oct 15;23(20):2768-74. doi: 10.1093/bioinformatics/btm393. Epub 2007 Aug 12. Bioinformatics. 2007. PMID: 17698493

3

Disambiguating the species of biomedical named entities using natural language parsers.

Wang X, Tsujii J, Ananiadou S. Wang X, et al. Among authors: tsujii j. Bioinformatics. 2010 Mar 1;26(5):661-7. doi: 10.1093/bioinformatics/btq002. Epub 2010 Jan 6. Bioinformatics. 2010. PMID: 20053840 Free PMC article.

4

Named entity recognition for bacterial Type IV secretion systems.

Ananiadou S, Sullivan D, Black W, Levow GA, Gillespie JJ, Mao C, Pyysalo S, Kolluru B, Tsujii J, Sobral B. Ananiadou S, et al. Among authors: tsujii j. PLoS One. 2011 Mar 29;6(3):e14780. doi: 10.1371/journal.pone.0014780. PLoS One. 2011. PMID: 21468321 Free PMC article.

5

Overview of the ID, EPI and REL tasks of BioNLP Shared Task 2011.

Pyysalo S, Ohta T, Rak R, Sullivan D, Mao C, Wang C, Sobral B, Tsujii J, Ananiadou S. Pyysalo S, et al. Among authors: tsujii j. BMC Bioinformatics. 2012 Jun 26;13 Suppl 11(Suppl 11):S2. doi: 10.1186/1471-2105-13-S11-S2. BMC Bioinformatics. 2012. PMID: 22759456 Free PMC article.

6

Automatic recognition of topic-classified relations between prostate cancer and genes using MEDLINE abstracts.

Chun HW, Tsuruoka Y, Kim JD, Shiba R, Nagata N, Hishiki T, Tsujii J. Chun HW, et al. Among authors: tsujii j. BMC Bioinformatics. 2006 Nov 24;7 Suppl 3(Suppl 3):S4. doi: 10.1186/1471-2105-7-S3-S4. BMC Bioinformatics. 2006. PMID: 17134477 Free PMC article.

7

Terminology-driven literature mining and knowledge acquisition in biomedicine.

Nenadić G, Mima H, Spasić I, Ananiadou S, Tsujii J. Nenadić G, et al. Among authors: tsujii j. Int J Med Inform. 2002 Dec 4;67(1-3):33-48. doi: 10.1016/s1386-5056(02)00055-2. Int J Med Inform. 2002. PMID: 12460630

8

MaSTerClass: a case-based reasoning system for the classification of biomedical terms.

Spasic I, Ananiadou S, Tsujii J. Spasic I, et al. Among authors: tsujii j. Bioinformatics. 2005 Jun 1;21(11):2748-58. doi: 10.1093/bioinformatics/bti338. Epub 2005 Feb 22. Bioinformatics. 2005. PMID: 15728115

9

Text mining and its potential applications in systems biology.

Ananiadou S, Kell DB, Tsujii J. Ananiadou S, et al. Among authors: tsujii j. Trends Biotechnol. 2006 Dec;24(12):571-9. doi: 10.1016/j.tibtech.2006.10.002. Epub 2006 Oct 12. Trends Biotechnol. 2006. PMID: 17045684 Review.

10

Filling the gaps between tools and users: a tool comparator, using protein-protein interaction as an example.

Kano Y, Nguyen N, Saetre R, Yoshida K, Miyao Y, Tsuruoka Y, Matsubayashi Y, Ananiadou S, Tsujii J. Kano Y, et al. Among authors: tsujii j. Pac Symp Biocomput. 2008:616-27. Pac Symp Biocomput. 2008. PMID: 18229720 Free article.

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