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A standardized framework for representation of ancestry data in genomics studies, with application to the NHGRI-EBI GWAS Catalog.
Morales J, Welter D, Bowler EH, Cerezo M, Harris LW, McMahon AC, Hall P, Junkins HA, Milano A, Hastings E, Malangone C, Buniello A, Burdett T, Flicek P, Parkinson H, Cunningham F, Hindorff LA, MacArthur JAL. Morales J, et al. Genome Biol. 2018 Feb 15;19(1):21. doi: 10.1186/s13059-018-1396-2. Genome Biol. 2018. PMID: 29448949 Free PMC article.
The new NHGRI-EBI Catalog of published genome-wide association studies (GWAS Catalog).
MacArthur J, Bowler E, Cerezo M, Gil L, Hall P, Hastings E, Junkins H, McMahon A, Milano A, Morales J, Pendlington ZM, Welter D, Burdett T, Hindorff L, Flicek P, Cunningham F, Parkinson H. MacArthur J, et al. Nucleic Acids Res. 2017 Jan 4;45(D1):D896-D901. doi: 10.1093/nar/gkw1133. Epub 2016 Nov 29. Nucleic Acids Res. 2017. PMID: 27899670 Free PMC article.
UniProt Tools.
Pundir S, Martin MJ, O'Donovan C; UniProt Consortium. Pundir S, et al. Curr Protoc Bioinformatics. 2016 Mar 24;53:1.29.1-1.29.15. doi: 10.1002/0471250953.bi0129s53. Curr Protoc Bioinformatics. 2016. PMID: 27010333 Free PMC article.
Searching and Navigating UniProt Databases.
Pundir S, Magrane M, Martin MJ, O'Donovan C; UniProt Consortium. Pundir S, et al. Curr Protoc Bioinformatics. 2015 Jun 19;50:1.27.1-1.27.10. doi: 10.1002/0471250953.bi0127s50. Curr Protoc Bioinformatics. 2015. PMID: 26088053 Free PMC article.
A standardized framing for reporting protein identifications in mzIdentML 1.2.
Seymour SL, Farrah T, Binz PA, Chalkley RJ, Cottrell JS, Searle BC, Tabb DL, Vizcaíno JA, Prieto G, Uszkoreit J, Eisenacher M, Martínez-Bartolomé S, Ghali F, Jones AR. Seymour SL, et al. Proteomics. 2014 Nov;14(21-22):2389-99. doi: 10.1002/pmic.201400080. Epub 2014 Sep 23. Proteomics. 2014. PMID: 25092112 Free PMC article.
17 results