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Characterizing false-positive fluorescence in situ hybridization results by mate-pair sequencing in a patient with chronic myeloid leukemia and progression to myeloid blast crisis.
Lopes JL, Webley M, Pitel BA, Pearce KE, Smadbeck JB, Johnson SH, Vasmatzis G, Sukov WR, Greipp PT, Hoppman NL, Ketterling RP, Baughn LB, Finn L, Peterson JF. Lopes JL, et al. Among authors: vasmatzis g. Cancer Genet. 2020 May;243:48-51. doi: 10.1016/j.cancergen.2020.02.008. Epub 2020 Mar 17. Cancer Genet. 2020. PMID: 32272434
Genome-wide analysis reveals recurrent structural abnormalities of TP63 and other p53-related genes in peripheral T-cell lymphomas.
Vasmatzis G, Johnson SH, Knudson RA, Ketterling RP, Braggio E, Fonseca R, Viswanatha DS, Law ME, Kip NS, Ozsan N, Grebe SK, Frederick LA, Eckloff BW, Thompson EA, Kadin ME, Milosevic D, Porcher JC, Asmann YW, Smith DI, Kovtun IV, Ansell SM, Dogan A, Feldman AL. Vasmatzis G, et al. Blood. 2012 Sep 13;120(11):2280-9. doi: 10.1182/blood-2012-03-419937. Epub 2012 Aug 1. Blood. 2012. PMID: 22855598 Free PMC article.
Lineage relationship of Gleason patterns in Gleason score 7 prostate cancer.
Kovtun IV, Cheville JC, Murphy SJ, Johnson SH, Zarei S, Kosari F, Sukov WR, Karnes RJ, Vasmatzis G. Kovtun IV, et al. Among authors: vasmatzis g. Cancer Res. 2013 Jun 1;73(11):3275-84. doi: 10.1158/0008-5472.CAN-12-2803. Epub 2013 May 21. Cancer Res. 2013. PMID: 23695551
A simple method for gene phasing using mate pair sequencing.
Cradic KW, Murphy SJ, Drucker TM, Sikkink RA, Eberhardt NL, Neuhauser C, Vasmatzis G, Grebe SK. Cradic KW, et al. Among authors: vasmatzis g. BMC Med Genet. 2014 Feb 6;15:19. doi: 10.1186/1471-2350-15-19. BMC Med Genet. 2014. PMID: 24502676 Free PMC article.
BIMA V3: an aligner customized for mate pair library sequencing.
Drucker TM, Johnson SH, Murphy SJ, Cradic KW, Therneau TM, Vasmatzis G. Drucker TM, et al. Among authors: vasmatzis g. Bioinformatics. 2014 Jun 1;30(11):1627-9. doi: 10.1093/bioinformatics/btu078. Epub 2014 Feb 12. Bioinformatics. 2014. PMID: 24526710
167 results