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53 results

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Unscrambling the genomic chaos of osteosarcoma reveals extensive transcript fusion, recurrent rearrangements and frequent novel TP53 aberrations.
Lorenz S, Barøy T, Sun J, Nome T, Vodák D, Bryne JC, Håkelien AM, Fernandez-Cuesta L, Möhlendick B, Rieder H, Szuhai K, Zaikova O, Ahlquist TC, Thomassen GO, Skotheim RI, Lothe RA, Tarpey PS, Campbell P, Flanagan A, Myklebost O, Meza-Zepeda LA. Lorenz S, et al. Among authors: vodak d. Oncotarget. 2016 Feb 2;7(5):5273-88. doi: 10.18632/oncotarget.6567. Oncotarget. 2016. PMID: 26672768 Free PMC article.
Performance comparison of four exome capture systems for deep sequencing.
Chilamakuri CS, Lorenz S, Madoui MA, Vodák D, Sun J, Hovig E, Myklebost O, Meza-Zepeda LA. Chilamakuri CS, et al. Among authors: vodak d. BMC Genomics. 2014 Jun 9;15(1):449. doi: 10.1186/1471-2164-15-449. BMC Genomics. 2014. PMID: 24912484 Free PMC article.
The androgen receptor controls expression of the cancer-associated sTn antigen and cell adhesion through induction of ST6GalNAc1 in prostate cancer.
Munkley J, Oltean S, Vodák D, Wilson BT, Livermore KE, Zhou Y, Star E, Floros VI, Johannessen B, Knight B, McCullagh P, McGrath J, Crundwell M, Skotheim RI, Robson CN, Leung HY, Harries LW, Rajan P, Mills IG, Elliott DJ. Munkley J, et al. Among authors: vodak d. Oncotarget. 2015 Oct 27;6(33):34358-74. doi: 10.18632/oncotarget.6024. Oncotarget. 2015. PMID: 26452038 Free PMC article.
TP53 Mutation Spectrum in Smokers and Never Smoking Lung Cancer Patients.
Halvorsen AR, Silwal-Pandit L, Meza-Zepeda LA, Vodak D, Vu P, Sagerup C, Hovig E, Myklebost O, Børresen-Dale AL, Brustugun OT, Helland Å. Halvorsen AR, et al. Among authors: vodak d. Front Genet. 2016 May 11;7:85. doi: 10.3389/fgene.2016.00085. eCollection 2016. Front Genet. 2016. PMID: 27242894 Free PMC article.
High number of kinome-mutations in non-small cell lung cancer is associated with reduced immune response and poor relapse-free survival.
Helland Å, Brustugun OT, Nakken S, Halvorsen AR, Dønnem T, Bremnes R, Busund LT, Sun J, Lorenz S, Solberg SK, Jørgensen LH, Vodak D, Myklebost O, Hovig E, Meza-Zepeda LA. Helland Å, et al. Among authors: vodak d. Int J Cancer. 2017 Jul 1;141(1):184-190. doi: 10.1002/ijc.30726. Epub 2017 Apr 21. Int J Cancer. 2017. PMID: 28387924 Free PMC article.
Sample-Index Misassignment Impacts Tumour Exome Sequencing.
Vodák D, Lorenz S, Nakken S, Aasheim LB, Holte H, Bai B, Myklebost O, Meza-Zepeda LA, Hovig E. Vodák D, et al. Sci Rep. 2018 Mar 28;8(1):5307. doi: 10.1038/s41598-018-23563-4. Sci Rep. 2018. PMID: 29593270 Free PMC article.
Patterns of genomic evolution in advanced melanoma.
Birkeland E, Zhang S, Poduval D, Geisler J, Nakken S, Vodak D, Meza-Zepeda LA, Hovig E, Myklebost O, Knappskog S, Lønning PE. Birkeland E, et al. Among authors: vodak d. Nat Commun. 2018 Jul 10;9(1):2665. doi: 10.1038/s41467-018-05063-1. Nat Commun. 2018. PMID: 29991680 Free PMC article.
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