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Page 1
Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography.
Normand P, Lapierre P, Tisa LS, Gogarten JP, Alloisio N, Bagnarol E, Bassi CA, Berry AM, Bickhart DM, Choisne N, Couloux A, Cournoyer B, Cruveiller S, Daubin V, Demange N, Francino MP, Goltsman E, Huang Y, Kopp OR, Labarre L, Lapidus A, Lavire C, Marechal J, Martinez M, Mastronunzio JE, Mullin BC, Niemann J, Pujic P, Rawnsley T, Rouy Z, Schenowitz C, Sellstedt A, Tavares F, Tomkins JP, Vallenet D, Valverde C, Wall LG, Wang Y, Medigue C, Benson DR. Normand P, et al. Among authors: wall lg. Genome Res. 2007 Jan;17(1):7-15. doi: 10.1101/gr.5798407. Epub 2006 Dec 6. Genome Res. 2007. PMID: 17151343 Free PMC article.
What stories can the Frankia genomes start to tell us?
Tisa LS, Beauchemin N, Gtari M, Sen A, Wall LG. Tisa LS, et al. Among authors: wall lg. J Biosci. 2013 Nov;38(4):719-26. doi: 10.1007/s12038-013-9364-1. J Biosci. 2013. PMID: 24287651
Phylogenomics reveals multiple losses of nitrogen-fixing root nodule symbiosis.
Griesmann M, Chang Y, Liu X, Song Y, Haberer G, Crook MB, Billault-Penneteau B, Lauressergues D, Keller J, Imanishi L, Roswanjaya YP, Kohlen W, Pujic P, Battenberg K, Alloisio N, Liang Y, Hilhorst H, Salgado MG, Hocher V, Gherbi H, Svistoonoff S, Doyle JJ, He S, Xu Y, Xu S, Qu J, Gao Q, Fang X, Fu Y, Normand P, Berry AM, Wall LG, Ané JM, Pawlowski K, Xu X, Yang H, Spannagl M, Mayer KFX, Wong GK, Parniske M, Delaux PM, Cheng S. Griesmann M, et al. Among authors: wall lg. Science. 2018 Jul 13;361(6398):eaat1743. doi: 10.1126/science.aat1743. Epub 2018 May 24. Science. 2018. PMID: 29794220
Draft genome sequence of Frankia sp. strain QA3, a nitrogen-fixing actinobacterium isolated from the root nodule of Alnus nitida.
Sen A, Beauchemin N, Bruce D, Chain P, Chen A, Walston Davenport K, Deshpande S, Detter C, Furnholm T, Ghodbhane-Gtari F, Goodwin L, Gtari M, Han C, Han J, Huntemann M, Ivanova N, Kyrpides N, Land ML, Markowitz V, Mavrommatis K, Nolan M, Nouioui I, Pagani I, Pati A, Pitluck S, Santos CL, Sur S, Szeto E, Tavares F, Teshima H, Thakur S, Wall L, Woyke T, Wishart J, Tisa LS. Sen A, et al. Genome Announc. 2013 Mar 21;1(2):e0010313. doi: 10.1128/genomeA.00103-13. Genome Announc. 2013. PMID: 23516220 Free PMC article.
Draft genome sequence of Frankia sp. strain CN3, an atypical, noninfective (Nod-) ineffective (Fix-) isolate from Coriaria nepalensis.
Ghodhbane-Gtari F, Beauchemin N, Bruce D, Chain P, Chen A, Walston Davenport K, Deshpande S, Detter C, Furnholm T, Goodwin L, Gtari M, Han C, Han J, Huntemann M, Ivanova N, Kyrpides N, Land ML, Markowitz V, Mavrommatis K, Nolan M, Nouioui I, Pagani I, Pati A, Pitluck S, Santos CL, Sen A, Sur S, Szeto E, Tavares F, Teshima H, Thakur S, Wall L, Woyke T, Tisa LS. Ghodhbane-Gtari F, et al. Genome Announc. 2013 Mar 14;1(2):e0008513. doi: 10.1128/genomeA.00085-13. Genome Announc. 2013. PMID: 23516212 Free PMC article.
Draft Genome Sequence of Frankia sp. Strain BMG5.12, a Nitrogen-Fixing Actinobacterium Isolated from Tunisian Soils.
Nouioui I, Beauchemin N, Cantor MN, Chen A, Detter JC, Furnholm T, Ghodhbane-Gtari F, Goodwin L, Gtari M, Han C, Han J, Huntemann M, Hua SX, Ivanova N, Kyrpides N, Markowitz V, Mavrommatis K, Mikhailova N, Nordberg HP, Ovchinnikova G, Pagani I, Pati A, Sen A, Sur S, Szeto E, Thakur S, Wall L, Wei CL, Woyke T, Tisa LS. Nouioui I, et al. Genome Announc. 2013 Jul 11;1(4):e00468-13. doi: 10.1128/genomeA.00468-13. Genome Announc. 2013. PMID: 23846272 Free PMC article.
Draft Genome Sequence of Frankia sp. Strain DC12, an Atypical, Noninfective, Ineffective Isolate from Datisca cannabina.
Tisa LS, Beauchemin N, Cantor MN, Furnholm T, Ghodhbane-Gtari F, Goodwin L, Copeland A, Gtari M, Huntemann M, Ivanova N, Kyrpides N, Markowitz V, Mavrommatis K, Mikhailova N, Nouioui I, Oshone R, Ovchinnikova G, Pagani I, Palaniappan K, Pati A, Sen A, Shapiro N, Szeto E, Wall L, Wishart J, Woyke T. Tisa LS, et al. Genome Announc. 2015 Aug 6;3(4):e00889-15. doi: 10.1128/genomeA.00889-15. Genome Announc. 2015. PMID: 26251504 Free PMC article.
62 results