Weeks N - Search Results

1

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis.

Haas BJ, Papanicolaou A, Yassour M, Grabherr M, Blood PD, Bowden J, Couger MB, Eccles D, Li B, Lieber M, MacManes MD, Ott M, Orvis J, Pochet N, Strozzi F, Weeks N, Westerman R, William T, Dewey CN, Henschel R, LeDuc RD, Friedman N, Regev A. Haas BJ, et al. Among authors: weeks n. Nat Protoc. 2013 Aug;8(8):1494-512. doi: 10.1038/nprot.2013.084. Epub 2013 Jul 11. Nat Protoc. 2013. PMID: 23845962 Free PMC article.

2

Complementary genetic and genomic approaches help characterize the linkage group I seed protein QTL in soybean.

Bolon YT, Joseph B, Cannon SB, Graham MA, Diers BW, Farmer AD, May GD, Muehlbauer GJ, Specht JE, Tu ZJ, Weeks N, Xu WW, Shoemaker RC, Vance CP. Bolon YT, et al. Among authors: weeks n. BMC Plant Biol. 2010 Mar 3;10:41. doi: 10.1186/1471-2229-10-41. BMC Plant Biol. 2010. PMID: 20199683 Free PMC article.

3

Genomics-assisted characterization of a breeding collection of Apios americana, an edible tuberous legume.

Belamkar V, Farmer AD, Weeks NT, Kalberer SR, Blackmon WJ, Cannon SB. Belamkar V, et al. Sci Rep. 2016 Oct 10;6:34908. doi: 10.1038/srep34908. Sci Rep. 2016. PMID: 27721469 Free PMC article.

4

Comprehensive characterization and RNA-Seq profiling of the HD-Zip transcription factor family in soybean (Glycine max) during dehydration and salt stress.

Belamkar V, Weeks NT, Bharti AK, Farmer AD, Graham MA, Cannon SB. Belamkar V, et al. BMC Genomics. 2014 Nov 3;15:950. doi: 10.1186/1471-2164-15-950. BMC Genomics. 2014. PMID: 25362847 Free PMC article.

5

The genome sequence of segmental allotetraploid peanut Arachis hypogaea.

Bertioli DJ, Jenkins J, Clevenger J, Dudchenko O, Gao D, Seijo G, Leal-Bertioli SCM, Ren L, Farmer AD, Pandey MK, Samoluk SS, Abernathy B, Agarwal G, Ballén-Taborda C, Cameron C, Campbell J, Chavarro C, Chitikineni A, Chu Y, Dash S, El Baidouri M, Guo B, Huang W, Kim KD, Korani W, Lanciano S, Lui CG, Mirouze M, Moretzsohn MC, Pham M, Shin JH, Shirasawa K, Sinharoy S, Sreedasyam A, Weeks NT, Zhang X, Zheng Z, Sun Z, Froenicke L, Aiden EL, Michelmore R, Varshney RK, Holbrook CC, Cannon EKS, Scheffler BE, Grimwood J, Ozias-Akins P, Cannon SB, Jackson SA, Schmutz J. Bertioli DJ, et al. Among authors: weeks nt. Nat Genet. 2019 May;51(5):877-884. doi: 10.1038/s41588-019-0405-z. Epub 2019 May 1. Nat Genet. 2019. PMID: 31043755

6

A new decade and new data at SoyBase, the USDA-ARS soybean genetics and genomics database.

Brown AV, Conners SI, Huang W, Wilkey AP, Grant D, Weeks NT, Cannon SB, Graham MA, Nelson RT. Brown AV, et al. Among authors: weeks nt. Nucleic Acids Res. 2021 Jan 8;49(D1):D1496-D1501. doi: 10.1093/nar/gkaa1107. Nucleic Acids Res. 2021. PMID: 33264401 Free PMC article.

7

High-throughput SNP discovery through deep resequencing of a reduced representation library to anchor and orient scaffolds in the soybean whole genome sequence.

Hyten DL, Cannon SB, Song Q, Weeks N, Fickus EW, Shoemaker RC, Specht JE, Farmer AD, May GD, Cregan PB. Hyten DL, et al. Among authors: weeks n. BMC Genomics. 2010 Jan 15;11:38. doi: 10.1186/1471-2164-11-38. BMC Genomics. 2010. PMID: 20078886 Free PMC article.

8

Legume information system (LegumeInfo.org): a key component of a set of federated data resources for the legume family.

Dash S, Campbell JD, Cannon EK, Cleary AM, Huang W, Kalberer SR, Karingula V, Rice AG, Singh J, Umale PE, Weeks NT, Wilkey AP, Farmer AD, Cannon SB. Dash S, et al. Nucleic Acids Res. 2016 Jan 4;44(D1):D1181-8. doi: 10.1093/nar/gkv1159. Epub 2015 Nov 5. Nucleic Acids Res. 2016. PMID: 26546515 Free PMC article.

9

Doing Genetic and Genomic Biology Using the Legume Information System and Associated Resources.

Redsun S, Hokin S, Cameron CT, Cleary AM, Berendzen J, Dash S, Brown AV, Wilkey A, Campbell JD, Huang W, Kalberer SR, Weeks NT, Cannon SB, Farmer AD. Redsun S, et al. Among authors: weeks nt. Methods Mol Biol. 2022;2443:81-100. doi: 10.1007/978-1-0716-2067-0_4. Methods Mol Biol. 2022. PMID: 35037201

10

Gene expression patterns are correlated with genomic and genic structure in soybean.

Woody JL, Severin AJ, Bolon YT, Joseph B, Diers BW, Farmer AD, Weeks N, Muehlbauer GJ, Nelson RT, Grant D, Specht JE, Graham MA, Cannon SB, May GD, Vance CP, Shoemaker RC. Woody JL, et al. Among authors: weeks n. Genome. 2011 Jan;54(1):10-8. doi: 10.1139/G10-090. Genome. 2011. PMID: 21217801

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