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A survey of best practices for RNA-seq data analysis.
Conesa A, Madrigal P, Tarazona S, Gomez-Cabrero D, Cervera A, McPherson A, Szcześniak MW, Gaffney DJ, Elo LL, Zhang X, Mortazavi A. Conesa A, et al. Among authors: zhang x. Genome Biol. 2016 Jan 26;17:13. doi: 10.1186/s13059-016-0881-8. Genome Biol. 2016. PMID: 26813401 Free PMC article. Review.
Comparison of metagenomic samples using sequence signatures.
Jiang B, Song K, Ren J, Deng M, Sun F, Zhang X. Jiang B, et al. Among authors: zhang x. BMC Genomics. 2012 Dec 27;13:730. doi: 10.1186/1471-2164-13-730. BMC Genomics. 2012. PMID: 23268604 Free PMC article.
Short read mapping for exome sequencing.
Zhou X, Bao S, Wang B, Zhang X, Song YQ. Zhou X, et al. Among authors: zhang x. Methods Mol Biol. 2013;1038:93-111. doi: 10.1007/978-1-62703-514-9_6. Methods Mol Biol. 2013. PMID: 23872971
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