Molecular characterisation of the Arabidopsis SBP-box genes

Gene. 1999 Sep 3;237(1):91-104. doi: 10.1016/s0378-1119(99)00308-x.

Abstract

The Arabidopsis thaliana SPL gene family represents a group of structurally diverse genes encoding putative transcription factors found apparently only in plants. The distinguishing characteristic of the SPL gene family is the SBP-box encoding a conserved protein domain of 76 amino acids in length, the SBP-domain, which is responsible for the interaction with DNA. We present here characterisation of 12 members of the SPL gene family. These genes show highly diverse genomic organisations and are found scattered over the Arabidopsis genome. Some SPL genes are constitutively expressed, while transcriptional activity of others is under developmental control. Based on phylogenetic reconstruction, gene structure and expression patterns, they can be divided into subfamilies. In addition to the Arabidopsis SPL genes, we isolated and determined the sequences of three SBP-box genes from Antirrhinum majus and seven from Zea mays.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Motifs
  • Amino Acid Sequence
  • Arabidopsis / genetics*
  • Base Sequence
  • Binding Sites
  • Chromosome Mapping
  • Deoxyribodipyrimidine Photo-Lyase / genetics
  • Gene Expression Regulation, Plant*
  • Molecular Sequence Data
  • Multigene Family*
  • Phylogeny*
  • Plant Development
  • Plant Proteins / genetics*
  • Plant Proteins / metabolism
  • Proteins*
  • Sequence Homology, Amino Acid
  • Zea mays / genetics

Substances

  • Plant Proteins
  • Proteins
  • spore photoproduct lyase
  • Deoxyribodipyrimidine Photo-Lyase

Associated data

  • GENBANK/AJ011609
  • GENBANK/AJ011610
  • GENBANK/AJ011611
  • GENBANK/AJ011612
  • GENBANK/AJ011613
  • GENBANK/AJ011614
  • GENBANK/AJ011615
  • GENBANK/AJ011616
  • GENBANK/AJ011617
  • GENBANK/AJ011618
  • GENBANK/AJ011619
  • GENBANK/AJ011620
  • GENBANK/AJ011621
  • GENBANK/AJ011622
  • GENBANK/AJ011623
  • GENBANK/AJ011624
  • GENBANK/AJ011625
  • GENBANK/AJ011626
  • GENBANK/AJ011627
  • GENBANK/AJ011628
  • GENBANK/AJ011629
  • GENBANK/AJ011630
  • GENBANK/AJ011631
  • GENBANK/AJ011632
  • GENBANK/AJ011633
  • GENBANK/AJ011634
  • GENBANK/AJ011635
  • GENBANK/AJ011636
  • GENBANK/AJ011637
  • GENBANK/AJ011638