Modeling and predicting individual variation in COVID-19 vaccine-elicited antibody response in the general population

PLOS Digit Health. 2024 May 3;3(5):e0000497. doi: 10.1371/journal.pdig.0000497. eCollection 2024 May.

Abstract

As we learned during the COVID-19 pandemic, vaccines are one of the most important tools in infectious disease control. To date, an unprecedentedly large volume of high-quality data on COVID-19 vaccinations have been accumulated. For preparedness in future pandemics beyond COVID-19, these valuable datasets should be analyzed to best shape an effective vaccination strategy. We are collecting longitudinal data from a community-based cohort in Fukushima, Japan, that consists of 2,407 individuals who underwent serum sampling two or three times after a two-dose vaccination with either BNT162b2 or mRNA-1273. Using the individually reconstructed time courses of the vaccine-elicited antibody response based on mathematical modeling, we first identified basic demographic and health information that contributed to the main features of the antibody dynamics, i.e., the peak, the duration, and the area under the curve. We showed that these three features of antibody dynamics were partially explained by underlying medical conditions, adverse reactions to vaccinations, and medications, consistent with the findings of previous studies. We then applied to these factors a recently proposed computational method to optimally fit an "antibody score", which resulted in an integer-based score that can be used as a basis for identifying individuals with higher or lower antibody titers from basic demographic and health information. The score can be easily calculated by individuals themselves or by medical practitioners. Although the sensitivity of this score is currently not very high, in the future, as more data become available, it has the potential to identify vulnerable populations and encourage them to get booster vaccinations. Our mathematical model can be extended to any kind of vaccination and therefore can form a basis for policy decisions regarding the distribution of booster vaccines to strengthen immunity in future pandemics.

Grants and funding

This study was supported by Medical & Biological Laboratories Co., Ltd., Shenzhen YHLO Biotech Co., Ltd., the distributor and manufacturer of the antibody measurement system (iFlash 3000), Research Center for Advanced Science and Technology in the University of Tokyo, and in part by Scientific Research (KAKENHI) B 18H01139 (to S.I.), 16H04845 (to S.I.); Scientific Research in Innovative Areas 20H05042 (to S.I.); AMED Strategic International Brain Science Research Promotion Program 22wm0425011s0302 (to K.A.); AMED JP22dm0307009 (to K.A.); AMED CREST 19gm1310002 (to S.I.); AMED Development of Vaccines for the Novel Coronavirus Disease, 21nf0101638h0001 (to M.T.), 21nf0101638s0201 (to S.I.); AMED Japan Program for Infectious Diseases Research and Infrastructure, 22wm0325007h0001 (to S.I.), 22wm0325004s0201 (to S.I.), 22wm0325012s0301 (to S.I.), 22wm0325015s0301 (to S.I.); AMED Research Program on Emerging and Re-emerging Infectious Diseases 22fk0108140s0802 (to S.I.); AMED Research Program on HIV/AIDS 22fk0410052s0401 (to S.I.); AMED Program for Basic and Clinical Research on Hepatitis 22fk0210094 (to S.I.); AMED Program on the Innovative Development and the Application of New Drugs for Hepatitis B 22fk0310504h0501 (to S.I.); AMED Research Program on Hepatitis 19fk0210036h0502 (to S.I.), 19fk0310114h0103 (to S.I.); JST MIRAI JPMJMI22G1 (to S.I.); Moonshot R&D JPMJMS2021 (to K.A. and S.I.) and JPMJMS2025 (to S.I.); The National Research Foundation of Korea (NRF) grant funded by the Korea government (MSIT) (2022R1C1C2003637) (to K.S.K.); The Shinnihon Foundation of Advanced Medical Treatment Research (to S.I.); SECOM Science and Technology Foundation (to S.I.); The Japan Prize Foundation (to S.I.); and Kowa Company, Ltd. (to M.T.). URL of funder websites: Medical & Biological Laboratories Co., Ltd. https://www.mblbio.com/e/ Shenzhen YHLO Biotech Co., Ltd. https://en.szyhlo.com/ Research Center for Advanced Science and Technology in the University of Tokyo https://www.rcast.u-tokyo.ac.jp/en/ KAKENHI https://www.jsps.go.jp/english/e-grants/ AMED https://www.amed.go.jp/en/index.html Moonshot R&D https://www.jst.go.jp/moonshot/en/ The National Research Foundation of Korea https://www.nrf.re.kr/eng/main The Shinnihon Foundation of Advanced Medical Treatment Research http://www.shinnihon-zaidan.jp/ The Japan Prize Foundation https://www.japanprize.jp/en/index.html Kowa Company, Ltd. https://www.kowa.co.jp/