Macfarlan TS - Search Results

1

Patterns of recombination in snakes reveal a tug-of-war between PRDM9 and promoter-like features.

Hoge C, de Manuel M, Mahgoub M, Okami N, Fuller Z, Banerjee S, Baker Z, McNulty M, Andolfatto P, Macfarlan TS, Schumer M, Tzika AC, Przeworski M. Hoge C, et al. Among authors: macfarlan ts. Science. 2024 Feb 23;383(6685):eadj7026. doi: 10.1126/science.adj7026. Epub 2024 Feb 23. Science. 2024. PMID: 38386752

2

AGO2 silences mobile transposons in the nucleus of quiescent cells.

Sala L, Kumar M, Prajapat M, Chandrasekhar S, Cosby RL, La Rocca G, Macfarlan TS, Awasthi P, Chari R, Kruhlak M, Vidigal JA. Sala L, et al. Among authors: macfarlan ts. Nat Struct Mol Biol. 2023 Dec;30(12):1985-1995. doi: 10.1038/s41594-023-01151-z. Epub 2023 Nov 20. Nat Struct Mol Biol. 2023. PMID: 37985687

3

Patterns of recombination in snakes reveal a tug of war between PRDM9 and promoter-like features.

Hoge C, de Manuel M, Mahgoub M, Okami N, Fuller Z, Banerjee S, Baker Z, McNulty M, Andolfatto P, Macfarlan TS, Schumer M, Tzika AC, Przeworski M. Hoge C, et al. Among authors: macfarlan ts. bioRxiv [Preprint]. 2023 Jul 11:2023.07.11.548536. doi: 10.1101/2023.07.11.548536. bioRxiv. 2023. PMID: 37502971 Free PMC article. Updated. Preprint.

4

MLL3/MLL4 methyltransferase activities control early embryonic development and embryonic stem cell differentiation in a lineage-selective manner.

Xie G, Lee JE, Senft AD, Park YK, Jang Y, Chakraborty S, Thompson JJ, McKernan K, Liu C, Macfarlan TS, Rocha PP, Peng W, Ge K. Xie G, et al. Among authors: macfarlan ts. Nat Genet. 2023 Apr;55(4):693-705. doi: 10.1038/s41588-023-01356-4. Epub 2023 Apr 3. Nat Genet. 2023. PMID: 37012455

5

Regulation of endogenous retrovirus-derived regulatory elements by GATA2/3 and MSX2 in human trophoblast stem cells.

Du C, Jiang J, Li Y, Yu M, Jin J, Chen S, Fan H, Macfarlan TS, Cao B, Sun MA. Du C, et al. Among authors: macfarlan ts. Genome Res. 2023 Feb;33(2):197-207. doi: 10.1101/gr.277150.122. Epub 2023 Feb 17. Genome Res. 2023. PMID: 36806146 Free PMC article.

6

Transposable elements shape the evolution of mammalian development.

Senft AD, Macfarlan TS. Senft AD, et al. Among authors: macfarlan ts. Nat Rev Genet. 2021 Nov;22(11):691-711. doi: 10.1038/s41576-021-00385-1. Epub 2021 Aug 5. Nat Rev Genet. 2021. PMID: 34354263 Review.

7

Endogenous Retroviruses Drive Lineage-Specific Regulatory Evolution across Primate and Rodent Placentae.

Sun MA, Wolf G, Wang Y, Senft AD, Ralls S, Jin J, Dunn-Fletcher CE, Muglia LJ, Macfarlan TS. Sun MA, et al. Among authors: macfarlan ts. Mol Biol Evol. 2021 Oct 27;38(11):4992-5004. doi: 10.1093/molbev/msab223. Mol Biol Evol. 2021. PMID: 34320657 Free PMC article.

8

KDM1A maintains genome-wide homeostasis of transcriptional enhancers.

Agarwal S, Bonefas KM, Garay PM, Brookes E, Murata-Nakamura Y, Porter RS, Macfarlan TS, Ren B, Iwase S. Agarwal S, et al. Among authors: macfarlan ts. Genome Res. 2021 Feb;31(2):186-197. doi: 10.1101/gr.234559.118. Epub 2021 Jan 7. Genome Res. 2021. PMID: 33414108 Free PMC article.

9

KRAB zinc finger protein diversification drives mammalian interindividual methylation variability.

Bertozzi TM, Elmer JL, Macfarlan TS, Ferguson-Smith AC. Bertozzi TM, et al. Among authors: macfarlan ts. Proc Natl Acad Sci U S A. 2020 Dec 8;117(49):31290-31300. doi: 10.1073/pnas.2017053117. Epub 2020 Nov 25. Proc Natl Acad Sci U S A. 2020. PMID: 33239447 Free PMC article.

10

KRAB-zinc finger protein gene expansion in response to active retrotransposons in the murine lineage.

Wolf G, de Iaco A, Sun MA, Bruno M, Tinkham M, Hoang D, Mitra A, Ralls S, Trono D, Macfarlan TS. Wolf G, et al. Among authors: macfarlan ts. Elife. 2020 Jun 1;9:e56337. doi: 10.7554/eLife.56337. Elife. 2020. PMID: 32479262 Free PMC article.

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