Quantitative determination of TCR cross-reactivity using peptide libraries and protein databases

Eur J Immunol. 1999 Aug;29(8):2385-91. doi: 10.1002/(SICI)1521-4141(199908)29:08<2385::AID-IMMU2385>3.0.CO;2-B.

Abstract

A single T cell clone can be activated by many different peptides in the context of a particular HLA molecule. To quantify the number of peptides that can be recognized by a CD4(+) T cell clone, we screened a one-bead-one-peptide synthetic peptide library and a protein database for peptides that stimulate an HLA-DR3-restricted, human glutamic acid decarboxylase (GAD65)-reactive CD4(+) T cell clone. Both the library screening and the database analysis indicated that this T cell clone is able to recognize approximately 10(6) 11-mer peptides at low nanomolar concentration. Furthermore, we determined that the frequency of cross-reactivity increased only 1.5-3 times when the peptide concentration increased 10 times, in the range of 0.01 - 1 microM. These data imply that there is a considerable potential for T cell cross-reactivity and are useful for studies on the role of molecular mimicry in the etiology of T cell-mediated disease.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • CD4-Positive T-Lymphocytes / immunology*
  • Clone Cells
  • Cross Reactions
  • Databases, Factual
  • Glutamate Decarboxylase / immunology
  • HLA-DR3 Antigen / immunology
  • Humans
  • Lymphocyte Activation
  • Molecular Mimicry
  • Peptide Library
  • Proteins / chemistry
  • Proteins / immunology
  • Receptors, Antigen, T-Cell / immunology*

Substances

  • HLA-DR3 Antigen
  • Peptide Library
  • Proteins
  • Receptors, Antigen, T-Cell
  • Glutamate Decarboxylase