The pattern of fluorine substitution affects binding affinity in a small library of fluoroaromatic inhibitors for carbonic anhydrase

Org Lett. 1999 Jul 29;1(2):183-5. doi: 10.1021/ol9905250.

Abstract

[formula: see text] A library of fluoroaromatic inhibitors of carbonic anhydrase has been found to bind in a manner dependent on both hydrophobicity and the pattern of substitution of the fluoroaromatic ring. All of the compounds in the library bind to the protein with Kd < 3 nM. We have inferred two distinct binding modes from our data, which suggest two types of interactions that should be considered when designing fluorinated drugs.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Carbonic Anhydrase Inhibitors / chemical synthesis*
  • Carbonic Anhydrase Inhibitors / metabolism
  • Crystallography
  • Fluorine / chemistry*
  • Magnetic Resonance Spectroscopy
  • Models, Biological
  • Octanes
  • Structure-Activity Relationship
  • Water

Substances

  • Carbonic Anhydrase Inhibitors
  • Octanes
  • Water
  • Fluorine
  • octane