Aldehyde dehydrogenase. Maintaining critical active site geometry at motif 8 in the class 3 enzyme

Eur J Biochem. 2001 Feb;268(3):722-6. doi: 10.1046/j.1432-1327.2001.01926.x.

Abstract

Alignment of all known, diverse members of the aldehyde dehydrogenase (ALDH) extended family revealed only two strictly conserved, nonglycine residues, a glutamate and a phenylalanine residue. Both occur in one of the highly conserved 'motif' segments and both occupy strategic locations in the tertiary structure at the bottom of the catalytic funnel. In class 3 ALDH, these are Glu333 and Phe335. In addition, Asp247, which is not highly conserved but is characteristic of class 3 ALDHs, hydrogen bonds the main chain between Glu333 and Phe335. These three residues were mutated conservatively. Michaelis constants determined for both NAD/propanal and NADP/benzaldehyde substrate pairs show all three residues to be crucial to effective catalysis, and suggest that the hydrogen bond to Asp247 is a key element in maintaining precise geometry of key elements at the active site.

MeSH terms

  • Aldehyde Dehydrogenase / chemistry*
  • Aldehyde Dehydrogenase / genetics
  • Aldehyde Dehydrogenase / isolation & purification
  • Amino Acid Motifs
  • Animals
  • Aspartic Acid / chemistry
  • Binding Sites
  • Catalysis
  • DNA, Complementary / metabolism
  • Electrophoresis, Polyacrylamide Gel
  • Escherichia coli / metabolism
  • Glutamic Acid / chemistry
  • Humans
  • Hydrogen Bonding
  • Kinetics
  • Models, Molecular
  • Mutagenesis, Site-Directed
  • Phenylalanine / chemistry
  • Rats

Substances

  • DNA, Complementary
  • Aspartic Acid
  • Glutamic Acid
  • Phenylalanine
  • Aldehyde Dehydrogenase