Phylogenetic heterogeneity of new HTLV type 1 isolates from southern India in subgroup A

AIDS Res Hum Retroviruses. 2005 Apr;21(4):325-30. doi: 10.1089/aid.2005.21.325.

Abstract

Seven isolates of human T cell leukemia virus type 1 (HTLV-1) were taken in southern India and phylogenetically analyzed to gain new insights into the origin and dissemination of HTLV-1 in the subcontinent. The new Indian HTLV-1s were found to be members of subgroup A (Transcontinental subgroup) of the Cosmopolitan group. They formed three different clusters (South African/Caribbean, Middle Eastern, and East Asian clusters). These results demonstrate that Indian HTLV-1s are genetically heterogeneous and include the most divergent strain of subgroup A. On the basis of these results, we speculate that subgroup A HTLV- 1s may have been present for thousands of years in India.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Child
  • DNA, Viral / chemistry
  • Female
  • HTLV-I Infections / virology*
  • Human T-lymphotropic virus 1 / genetics*
  • Human T-lymphotropic virus 1 / isolation & purification
  • Humans
  • India
  • Male
  • Middle Aged
  • Molecular Sequence Data
  • Phylogeny
  • Polymorphism, Genetic*
  • Sequence Analysis, DNA
  • Terminal Repeat Sequences / genetics

Substances

  • DNA, Viral

Associated data

  • GENBANK/AY607576
  • GENBANK/AY607577
  • GENBANK/AY607578
  • GENBANK/AY607579
  • GENBANK/AY607580
  • GENBANK/AY607581
  • GENBANK/AY607582