RDE-1 slicer activity is required only for passenger-strand cleavage during RNAi in Caenorhabditis elegans

Nat Struct Mol Biol. 2009 Feb;16(2):207-11. doi: 10.1038/nsmb.1541. Epub 2009 Jan 18.

Abstract

RNA interference (RNAi) is a process in which double-stranded RNA is cleaved into small interfering RNAs (siRNAs) that induce the destruction of homologous single-stranded mRNAs. Argonaute proteins are essential components of this silencing process; they bind siRNAs directly and can cleave RNA targets using a conserved RNase H motif. In Caenorhabditis elegans, the Argonaute protein RDE-1 has a central role in RNAi. In animals lacking RDE-1, the introduction of double-stranded RNA does not trigger any detectable level of RNAi. Here we show that RNase H activity of RDE-1 is required only for efficient removal of the passenger strand of the siRNA duplex and not for triggering the silencing response at the target-mRNA level. These results uncouple the role of the RDE-1 RNase H activity in small RNA maturation from its role in target-mRNA silencing in vivo.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Caenorhabditis elegans / metabolism*
  • Caenorhabditis elegans Proteins / metabolism*
  • RNA Interference
  • RNA Stability
  • RNA, Double-Stranded / metabolism
  • RNA, Small Interfering / metabolism
  • Ribonuclease H / metabolism

Substances

  • Caenorhabditis elegans Proteins
  • RNA, Double-Stranded
  • RNA, Small Interfering
  • rde-1 protein, C elegans
  • Ribonuclease H