Modern laser-based haematology analysers such as the ADVIA 120 have species-specific software and offer the possibility of assessing new haematological parameters. These parameters have yet to be evaluated, and as these analysers are often used in referral laboratories, it is important to know whether the values of haematological parameters change during sample transport. Therefore, samples of EDTA-anticoagulated blood from nine healthy dogs and EDTA- and citrate-anticoagulated blood from six healthy horses were collected and stored at room temperature for 72 and 48 hours, respectively. In canine samples, WBC and the red blood cell parameters Hb, Hb(cell), Ht, MCV, and MCHC changed significantly after only 24 hours of storage. Thus if canine blood samples need to be stored for 24 hours or longer, Hb, RBC, and MCH would appear to be more reliable parameters than Ht, Hb(cell), MCV, and MCHC. The cytoplasmic haemoglobin content (CH(R)) remained stable up to 48 hours. Both dog and horse platelet numbers were stable over time when blood was anticoagulated with EDTA. Of the platelet-derived parameters, MPC was already significantly lower 2 hours after collection of equine blood samples and was also significantly lower 24 hours after collection of canine blood samples. In contrast, MPV levels were significantly higher 48 hours after sample collection. Initial platelet numbers and platelet parameters were significantly different in citrate-anticoagulated blood and EDTA-anticoagulated blood, and platelet numbers and MPM decreased significantly in citrate-anticoagulated blood samples after only 4 hours of storage. After reference intervals for CH(R) had been established using samples from 53 non-anaemic dogs and 150 non-anaemic cats, the use of CH(R) to detect iron deficiency anaemia was tested in 63 dogs and 55 cats with different diseases. With the help of ROC curves, the optimal cut-off point was determined to be 1.22 fmol in dogs and 0.88 fmol in cats, resulting in a sensitivity of 95.2% and a specificity of 90.5% in dogs and 93.8% and 76.9% in cats, respectively.