Isolation and complete nucleotide sequence of the measles virus IMB-1 strain in China

Virol Sin. 2010 Dec;25(6):381-9. doi: 10.1007/s12250-010-3158-5. Epub 2010 Dec 21.

Abstract

The complete nucleotide sequence of the measles virus strain IMB-1, which was isolated in China, was determined. As in other measles viruses, its genome is 15,894 nucleotides in length and encodes six proteins. The full-length nucleotide sequence of the IMB-1 isolate differed from vaccine strains (including wild-type Edmonston strain) by 4%-5% at the nucleotide sequence level. This isolate has amino acid variations over the full genome, including in the hemagglutinin and fusion genes. This report is the first to describe the full-length genome of a genotype H1 strain and provide an overview of the diversity of genetic characteristics of a circulating measles virus.

Publication types

  • Case Reports
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Substitution
  • Base Sequence*
  • Child
  • China
  • Female
  • Genome, Viral*
  • Humans
  • Measles / virology
  • Measles virus / genetics*
  • Measles virus / isolation & purification*
  • Molecular Sequence Data
  • RNA, Viral / genetics*
  • Sequence Analysis, DNA
  • Sequence Homology, Nucleic Acid
  • Viral Proteins / genetics

Substances

  • RNA, Viral
  • Viral Proteins

Associated data

  • GENBANK/FJ161211