Genotype of varicella-zoster virus isolates in South Korea

J Clin Microbiol. 2011 May;49(5):1913-6. doi: 10.1128/JCM.02356-10. Epub 2011 Mar 16.

Abstract

Information about the genotype of varicella-zoster virus (VZV) is useful to monitor outbreaks of vaccine strains. However, in South Korea, where varicella vaccine was introduced in 1988, there are limited data about the genotype of VZV. VZV was isolated from vesicular lesions of patients with herpes zoster or varicella in South Korea between January 2007 and June 2009. DNAs were purified from single-passage isolates. The genotype was determined by sequence analysis of open reading frame (ORF) 22. The PstI restriction enzyme site in ORF 38 and the BglI restriction enzyme site in ORF 54 were evaluated by restriction enzyme analysis. Forty-four patients with herpes zoster and nine patients with varicella were enrolled. The median age of patients with herpes zoster was 59.5 (range, 10 to 77) years, and the median age of patients with varicella was 8 (range, 6 to 9) years. In sequence analysis of ORF 22, all isolates were genotype J, irrespective of the age group. In restriction enzyme analysis, 51 of 54 (94.3%) isolates contained a PstI site in ORF 38, and all isolates contained a BglI site in ORF 54. Our data suggest that genotype J has been circulating since the 1940s in South Korea.

MeSH terms

  • Adolescent
  • Adult
  • Aged
  • Chickenpox / epidemiology*
  • Chickenpox / virology*
  • Child
  • Cluster Analysis
  • DNA, Viral / chemistry
  • DNA, Viral / genetics
  • Female
  • Genotype
  • Herpes Zoster / epidemiology*
  • Herpes Zoster / virology*
  • Herpesvirus 3, Human / classification
  • Herpesvirus 3, Human / genetics*
  • Herpesvirus 3, Human / isolation & purification*
  • Humans
  • Male
  • Middle Aged
  • Molecular Epidemiology
  • Molecular Sequence Data
  • Republic of Korea / epidemiology
  • Sequence Analysis, DNA
  • Viral Proteins / genetics
  • Young Adult

Substances

  • DNA, Viral
  • Viral Proteins

Associated data

  • GENBANK/FJ425229
  • GENBANK/FJ425230
  • GENBANK/FJ425231
  • GENBANK/FJ425232
  • GENBANK/FJ425233
  • GENBANK/FJ425234
  • GENBANK/FJ425235
  • GENBANK/FJ425236
  • GENBANK/FJ425237
  • GENBANK/FJ425238
  • GENBANK/FJ425239
  • GENBANK/FJ425240
  • GENBANK/FJ425241
  • GENBANK/FJ425242
  • GENBANK/FJ425243
  • GENBANK/FJ425244
  • GENBANK/FJ425245
  • GENBANK/FJ425246
  • GENBANK/FJ425247
  • GENBANK/FJ425248
  • GENBANK/FJ425249
  • GENBANK/FJ425250
  • GENBANK/FJ425251
  • GENBANK/FJ425252
  • GENBANK/FJ425253
  • GENBANK/FJ425254
  • GENBANK/FJ425255
  • GENBANK/FJ425256
  • GENBANK/FJ425257
  • GENBANK/FJ425258
  • GENBANK/FJ425259
  • GENBANK/FJ425260
  • GENBANK/FJ425261
  • GENBANK/FJ425262
  • GENBANK/FJ425263
  • GENBANK/FJ425264
  • GENBANK/FJ425265
  • GENBANK/FJ425266
  • GENBANK/FJ425267
  • GENBANK/FJ425268
  • GENBANK/FJ425269
  • GENBANK/FJ425270
  • GENBANK/FJ425271
  • GENBANK/FJ425272