A distal pocket Leu residue inhibits the binding of O2 and NO at the distal heme site of cytochrome c'

J Am Chem Soc. 2012 Jan 25;134(3):1461-3. doi: 10.1021/ja209770p. Epub 2012 Jan 9.

Abstract

Cytochromes c' are pentacoordinate heme proteins with sterically hindered distal sites that bind NO and CO but do not form stable complexes with O(2). Removal of distal pocket steric hindrance via a Leu→Ala mutation yields favorable O(2) binding (K(d) ~49 nM) without apparent H-bond stabilization of the Fe-O(2) moiety, as well as an extremely high distal heme-NO affinity (K(d) ~70 fM). The native Leu residue inhibits distal coordination of diatomic ligands by decreasing k(on) as well as increasing k(off). The connection between distal steric constraints, k(off) values, and distal to proximal heme-NO conversion is discussed.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Alcaligenes / enzymology*
  • Alcaligenes / genetics
  • Alcaligenes / metabolism
  • Binding Sites
  • Cytochromes c / chemistry
  • Cytochromes c / genetics*
  • Cytochromes c / metabolism*
  • Heme / chemistry
  • Heme / genetics
  • Heme / metabolism*
  • Leucine / metabolism
  • Nitric Oxide / metabolism*
  • Oxygen / metabolism*
  • Point Mutation

Substances

  • Nitric Oxide
  • Heme
  • Cytochromes c
  • Leucine
  • Oxygen