Promoter-Specific Hypomethylation Correlates with IL-1β Overexpression in Tuberous Sclerosis Complex (TSC)

J Mol Neurosci. 2016 Aug;59(4):464-70. doi: 10.1007/s12031-016-0750-7. Epub 2016 Apr 28.

Abstract

In tuberous sclerosis complex (TSC), overexpression of numerous genes associated with inflammation has been observed. Among different proinflammatory cytokines, interleukin-1β (IL-1β) has been shown to be significantly involved in epileptogenesis and maintenance of seizures. Recent evidence indicates that IL-1β gene expression can be regulated by DNA methylation of its promoter. In the present study, we hypothesized that hypomethylation in the promoter region of the IL-1β gene may underlie its overexpression observed in TSC brain tissue. Bisulfite sequencing was used to study the methylation status of the promoter region of the IL-1β gene in TSC and control samples. We identified hypomethylation in the promoter region of the IL-1β gene in TSC samples. IL-1β is overexpressed in tubers, and gene expression is correlated with promoter hypomethylation at CpG and non-CpG sites. Our results provide the first evidence of epigenetic modulation of the IL-1β signaling in TSC. Thus, strategies that target epigenetic alterations could offer new therapeutic avenues to control the persistent activation of interleukin-1β-mediated inflammatory signaling in TSC brain.

Keywords: Cortical tuber; Epigenetic regulation; Inflammation; Interleukin-1β; Tuberous sclerosis complex.

MeSH terms

  • Adolescent
  • Brain / metabolism
  • Case-Control Studies
  • Child
  • CpG Islands
  • DNA Methylation*
  • Epigenesis, Genetic
  • Female
  • Humans
  • Interleukin-1beta / genetics
  • Interleukin-1beta / metabolism*
  • Male
  • Promoter Regions, Genetic*
  • Tuberous Sclerosis / genetics
  • Tuberous Sclerosis / metabolism*
  • Up-Regulation

Substances

  • Interleukin-1beta