APOBEC3B deletion impacts on susceptibility to acquire HIV-1 and its advancement among individuals in western India

APMIS. 2016 Oct;124(10):881-7. doi: 10.1111/apm.12578. Epub 2016 Aug 15.

Abstract

APOBEC3B deletion polymorphism has been associated with risk of HIV-1 acquisition and its progression. Therefore, we aimed to investigate the association of APOBEC3B ins/del polymorphism with risk of acquisition of HIV-1 and its progression. In the present case-control study, we enrolled a total of 150 HIV-infected individuals and 150 healthy controls. Polymorphism for APOBEC3B gene was genotyped by PCR. APOBEC3B ID, DD genotypes, and D allele were associated with higher risk of acquisition of HIV-1 (p = 0.004, OR = 4.96; p = 0.03, OR = 3.55; and p = 0.004; OR = 1.60). The individuals with ID genotypes and combined genotype ID+DD of APOBEC3B in the presence of tobacco and alcohol showed the higher risk of advancement of HIV disease; however, risk could not reach statistical significance (OR = 1.14, 95% CI: 0.59-2.18; OR = 1.33, 95% CI: 0.83-2.15 and OR = 1.44, 95% CI: 0.77-2.69; OR = 1.50, 95% CI: 0.94-2.40). Individuals in advanced HIV disease stage and ID genotype and combined genotype ID + DD of APOBEC3B were more likely to be associated with advanced HIV disease stage but risk could not reach significant (OR = 1.50, 95% CI: 0.94-2.40; OR = 1.27, 95% CI: 0.88-1.84). Individuals with ID and DD genotype of APOBEC3B had influence on susceptibility to acquisition of HIV-1. This suggests that APOBEC3B deletion may attenuate innate cellular immunity against HIV-1 and thus confer the host persistence for HIV infection.

Keywords: AIDS restriction gene; APOBEC3B; HIV disease progression; acquisition of HIV-1; genetic susceptibility.

MeSH terms

  • Adolescent
  • Adult
  • Case-Control Studies
  • Cytidine Deaminase / deficiency*
  • Cytidine Deaminase / genetics
  • Disease Progression
  • Female
  • Gene Frequency
  • Genetic Predisposition to Disease*
  • Genotyping Techniques
  • HIV Infections / epidemiology*
  • HIV Infections / genetics*
  • HIV-1 / immunology*
  • Humans
  • INDEL Mutation*
  • India / epidemiology
  • Male
  • Middle Aged
  • Minor Histocompatibility Antigens / genetics
  • Polymerase Chain Reaction
  • Risk Assessment
  • Young Adult

Substances

  • Minor Histocompatibility Antigens
  • APOBEC3B protein, human
  • Cytidine Deaminase