Solid-State NMR Structural Characterization of Self-Assembled Peptides with Selective 13C and 15N Isotopic Labels

Methods Mol Biol. 2018:1777:23-68. doi: 10.1007/978-1-4939-7811-3_2.

Abstract

For the structural characterization methods discussed here, information on molecular conformation and intermolecular organization within nanostructured peptide assemblies is discerned through analysis of solid-state NMR spectral features. This chapter reviews general NMR methodologies, requirements for sample preparation, and specific descriptions of key experiments. An attempt is made to explain choices of solid-state NMR experiments and interpretation of results in a way that is approachable to a nonspecialist. Measurements are designed to determine precise NMR peak positions and line widths, which are correlated with secondary structures, and probe nuclear spin-spin interactions that report on three-dimensional organization of atoms. The formulation of molecular structural models requires rationalization of data sets obtained from multiple NMR experiments on samples with carefully chosen 13C and 15N isotopic labels. The information content of solid-state NMR data has been illustrated mostly through the use of simulated data sets and references to recent structural work on amyloid fibril-forming peptides and designer self-assembling peptides.

Keywords: Dipolar redoubling; Selective isotopic labeling; Self-assembling peptide; Solid-state NMR; Two-dimensional NMR.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Review

MeSH terms

  • Carbon-13 Magnetic Resonance Spectroscopy
  • Isotope Labeling
  • Magnetic Resonance Spectroscopy*
  • Molecular Structure*
  • Nanofibers / chemistry
  • Nitrogen Isotopes
  • Peptides / chemistry*

Substances

  • Nitrogen Isotopes
  • Peptides