Lack of Additional Diagnostic Yield of 16s rRNA Gene PCR for Prosthetic Joint Infections

J Appl Lab Med. 2019 Sep;4(2):224-228. doi: 10.1373/jalm.2018.027003. Epub 2019 Feb 26.

Abstract

Introduction: Medical management of prosthetic joint infections (PJIs) relies on the identification of causative organisms through traditional culture-based approaches to guide therapy. However, diagnosis of many PJIs remains challenging, with many clinically apparent infections remaining culture-negative. Molecular diagnostics have the potential to increase diagnostic yield, particularly among culture-negative PJIs.

Methods: Bone, tissue, or synovial fluid from patients with clinically identified PJIs were collected for inclusion in this study. Samples were assessed with traditional cultures and classified as culture-positive or -negative after 48 h. Samples subsequently underwent a Staphylococcus aureus-/Kingella kingae-specific PCR followed by a 16s rRNA gene PCR.

Results: A total of 77 unique patients with clinically identified PJIs contributed a total of 89 samples for inclusion in the study. There were 54 culture-negative and 35 culture-positive samples evaluated. The sensitivity and specificity of S. aureus PCR in culture-positive samples was 57.1% (95% CI, 34.1%-78.1%) and 92.9% (95% CI, 66.1%-98.9%), respectively. Among culture-positive samples, 16s rRNA gene PCR correctly identified 3 of 21 (14.3%) samples with S. aureus and 2 of 5 (40%) samples with Streptococcus spp. All molecular tests were negative in those with clinically identified, culture-negative PJI.

Conclusions: Our study suggests that these diagnostic tools have a limited role in PJI diagnosis.

Publication types

  • Evaluation Study
  • Research Support, N.I.H., Extramural

MeSH terms

  • Adult
  • Aged
  • Aged, 80 and over
  • Arthritis, Infectious / diagnosis*
  • Arthritis, Infectious / microbiology
  • Arthritis, Infectious / pathology
  • Bacteriological Techniques / methods*
  • Bacteriological Techniques / statistics & numerical data
  • Bone and Bones / microbiology
  • Bone and Bones / pathology
  • DNA, Bacterial / isolation & purification
  • Female
  • Humans
  • Joints / microbiology
  • Joints / pathology
  • Kingella kingae / genetics
  • Kingella kingae / isolation & purification
  • Male
  • Middle Aged
  • Neisseriaceae Infections / diagnosis*
  • Neisseriaceae Infections / microbiology
  • Neisseriaceae Infections / pathology
  • Polymerase Chain Reaction / statistics & numerical data
  • Prosthesis-Related Infections / diagnosis*
  • Prosthesis-Related Infections / microbiology
  • Prosthesis-Related Infections / pathology
  • RNA, Ribosomal, 16S / genetics
  • Staphylococcal Infections / diagnosis*
  • Staphylococcal Infections / microbiology
  • Staphylococcal Infections / pathology
  • Staphylococcus aureus / genetics
  • Staphylococcus aureus / isolation & purification
  • Synovial Fluid / microbiology
  • Young Adult

Substances

  • DNA, Bacterial
  • RNA, Ribosomal, 16S