Identification of prognostic immune genes in laryngeal cancer

J Int Med Res. 2020 Nov;48(11):300060520964662. doi: 10.1177/0300060520964662.

Abstract

Objective: In this study, we aimed to identify prognostic immune-related genes and establish a prognostic model for laryngeal cancer based on these genes.

Methods: Transcriptome profiles and clinical data of patients with laryngeal cancer were downloaded from The Cancer Genome Atlas database. Integrated bioinformatics analyses were performed to identify genes associated with prognosis.

Results: Thirty prognostic immune-related genes for laryngeal cancer were identified. We constructed a regulatory network of prognosis comprising transcription factors and immune-related genes. Multivariate Cox regression analyses identified 15 immune-related genes in the network that were used to establish the prognostic model. The model exhibited excellent prognostic prediction ability with a high area under the curve value (0.916). The calculated risk score based on expression of the 15 immune-related genes was shown to be an independent prognostic factor for laryngeal cancer.

Conclusion: We identified prognostic immune-related genes and established a prognostic model for laryngeal cancer, which might help identify novel predictive biomarkers and therapeutic targets of laryngeal cancer.

Keywords: The Cancer Genome Atlas; immune; laryngeal cancer; prognosis; risk score; survival.

MeSH terms

  • Biomarkers, Tumor / genetics
  • Gene Expression Profiling
  • Gene Expression Regulation, Neoplastic
  • Humans
  • Laryngeal Neoplasms* / genetics
  • Prognosis

Substances

  • Biomarkers, Tumor