1 CESP (Center for Research in Epidemiology and Population Health), Fac. de Médecine - Univ. Paris-Sud, Fac. de Médecine - UVSQ, INSERM, Université Paris Saclay, Villejuif, France; Gustave Roussy, Villejuif, France. Electronic address: Thibault.fiolet@gustaveroussy.fr.
2 Department of Plant Molecular Biology, Faculty of Biology and Medicine, University of Lausanne, Switzerland.
3 Laboratory of Soil Biodiversity, Faculty of Science, University of Neuchâtel, Switzerland.
4 Université de Paris, IAME, INSERM, Paris, France; National Institute for Health Research Health Protection Research Unit in Healthcare Associated Infections and Antimicrobial Resistance, Imperial College London, London, UK; Infectious and Tropical Diseases Department, Bichat-Claude Bernard Hospital, AP-HP, Paris, France.
5 CESP (Center for Research in Epidemiology and Population Health), Fac. de Médecine - Univ. Paris-Sud, Fac. de Médecine - UVSQ, INSERM, Université Paris Saclay, Villejuif, France; Gustave Roussy, Villejuif, France.