Abstract
Numerous lines of evidence have shown that the interaction between the nuclear and mitochondrial genomes ensures the efficient functioning of the OXPHOS complexes, with substantial implications in bioenergetics, adaptation, and disease. Their interaction is a fascinating and complex trait of the eukaryotic cell that MitImpact explores with its third major release. MitImpact expands its collection of genomic, clinical, and functional annotations of all non-synonymous substitutions of the human mitochondrial genome with new information on putative Compensated Pathogenic Deviations and co-varying amino acid sites of the Respiratory Chain subunits. It further provides evidence of energetic and structural residue compensation by techniques of molecular dynamics simulation. MitImpact is freely accessible at http://mitimpact.css-mendel.it.
© The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research.
Publication types
-
Research Support, Non-U.S. Gov't
MeSH terms
-
Amino Acid Substitution
-
Animals
-
Cetacea
-
Electron Transport
-
Electron Transport Chain Complex Proteins / chemistry*
-
Electron Transport Chain Complex Proteins / genetics
-
Electron Transport Chain Complex Proteins / metabolism
-
Gene Ontology
-
Humans
-
Internet
-
Mitochondria / genetics*
-
Mitochondria / metabolism
-
Mitochondria / pathology
-
Mitochondrial Diseases / genetics*
-
Mitochondrial Diseases / metabolism
-
Mitochondrial Diseases / pathology
-
Mitochondrial Proteins / chemistry*
-
Mitochondrial Proteins / genetics
-
Mitochondrial Proteins / metabolism
-
Models, Molecular
-
Molecular Sequence Annotation
-
Mutation
-
Oxidative Phosphorylation
-
Primates
-
Protein Interaction Domains and Motifs
-
Protein Structure, Secondary
-
Protein Subunits / chemistry*
-
Protein Subunits / genetics
-
Protein Subunits / metabolism
-
Rodentia
-
Software*
Substances
-
Electron Transport Chain Complex Proteins
-
Mitochondrial Proteins
-
Protein Subunits