Identifying cases of spinal cord injury or disease in a primary care electronic medical record database

J Spinal Cord Med. 2021;44(sup1):S28-S39. doi: 10.1080/10790268.2021.1971357.

Abstract

Objective: To identify cases of spinal cord injury or disease (SCI/D) in an Ontario database of primary care electronic medical records (EMR).

Design: A reference standard of cases of chronic SCI/D was established via manual review of EMRs; this reference standard was used to evaluate potential case identification algorithms for use in the same database.

Setting: Electronic Medical Records Primary Care (EMRPC) Database, Ontario, Canada.

Participants: A sample of 48,000 adult patients was randomly selected from 213,887 eligible patients in the EMRPC database.

Interventions: N/A.

Main outcome measure(s): Candidate algorithms were evaluated using sensitivity, specificity, positive predictive value (PPV), negative predictive value (NPV), and F-score.

Results: 126 cases of chronic SCI/D were identified, forming the reference standard. Of these, 57 were cases of traumatic spinal cord injury (TSCI), and 67 were cases of non-traumatic spinal cord injury (NTSCI). The optimal case identification algorithm used free-text keyword searches and a physician billing code, and had 70.6% sensitivity (61.9-78.4), 98.5% specificity (97.3-99.3), 89.9% PPV (82.2-95.0), 94.7% NPV (92.8-96.3), and an F-score of 79.1.

Conclusions: Identifying cases of chronic SCI/D from a database of primary care EMRs using free-text entries is feasible, relying on a comprehensive case definition. Identifying a cohort of patients with SCI/D will allow for future study of the epidemiology and health service utilization of these patients.

Keywords: Case identification; Electronic medical records; Primary health care; Spinal cord injury.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Databases, Factual
  • Electronic Health Records*
  • Humans
  • Ontario
  • Primary Health Care
  • Spinal Cord Injuries* / diagnosis
  • Spinal Cord Injuries* / epidemiology