Comparative transcriptomics reveals circadian and pluripotency networks as two pillars of longevity regulation

Cell Metab. 2022 Jun 7;34(6):836-856.e5. doi: 10.1016/j.cmet.2022.04.011. Epub 2022 May 16.

Abstract

Mammals differ more than 100-fold in maximum lifespan. Here, we conducted comparative transcriptomics on 26 species with diverse lifespans. We identified thousands of genes with expression levels negatively or positively correlated with a species' maximum lifespan (Neg- or Pos-MLS genes). Neg-MLS genes are primarily involved in energy metabolism and inflammation. Pos-MLS genes show enrichment in DNA repair, microtubule organization, and RNA transport. Expression of Neg- and Pos-MLS genes is modulated by interventions, including mTOR and PI3K inhibition. Regulatory networks analysis showed that Neg-MLS genes are under circadian regulation possibly to avoid persistent high expression, whereas Pos-MLS genes are targets of master pluripotency regulators OCT4 and NANOG and are upregulated during somatic cell reprogramming. Pos-MLS genes are highly expressed during embryogenesis but significantly downregulated after birth. This work provides targets for anti-aging interventions by defining pathways correlating with longevity across mammals and uncovering circadian and pluripotency networks as central regulators of longevity.

Keywords: aging; circadian clock; comparative transcriptomics; epigenetic reprogramming; functional genomics; longevity; pluripotency.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Aging / physiology
  • Animals
  • DNA Repair
  • Longevity* / genetics
  • Mammals / genetics
  • Transcriptome* / genetics