Predictive data-driven modeling of C-terminal tyrosine function in the EGFR signaling network

Life Sci Alliance. 2023 May 11;6(8):e202201466. doi: 10.26508/lsa.202201466. Print 2023 Aug.

Abstract

The epidermal growth factor receptor (EGFR) has been studied extensively because of its critical role in cellular signaling and association with disease. Previous models have elucidated interactions between EGFR and downstream adaptor proteins or showed phenotypes affected by EGFR. However, the link between specific EGFR phosphorylation sites and phenotypic outcomes is still poorly understood. Here, we employed a suite of isogenic cell lines expressing site-specific mutations at each of the EGFR C-terminal phosphorylation sites to interrogate their role in the signaling network and cell biological response to stimulation. Our results demonstrate the resilience of the EGFR network, which was largely similar even in the context of multiple Y-to-F mutations in the EGFR C-terminal tail, while also revealing nodes in the network that have not previously been linked to EGFR signaling. Our data-driven model highlights the signaling network nodes associated with distinct EGF-driven cell responses, including migration, proliferation, and receptor trafficking. Application of this same approach to less-studied RTKs should provide a plethora of novel associations that should lead to an improved understanding of these signaling networks.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Epidermal Growth Factor* / genetics
  • Epidermal Growth Factor* / metabolism
  • ErbB Receptors / genetics
  • ErbB Receptors / metabolism
  • Phosphorylation
  • Signal Transduction / genetics
  • Tyrosine* / genetics
  • Tyrosine* / metabolism

Substances

  • Tyrosine
  • Epidermal Growth Factor
  • ErbB Receptors