Optimizing the conversion of phosphoenolpyruvate to lactate by enzymatic channeling with mixed nanoparticle display

Cell Rep Methods. 2024 May 20;4(5):100764. doi: 10.1016/j.crmeth.2024.100764. Epub 2024 May 6.

Abstract

Co-assembling enzymes with nanoparticles (NPs) into nanoclusters allows them to access channeling, a highly efficient form of multienzyme catalysis. Using pyruvate kinase (PykA) and lactate dehydrogenase (LDH) to convert phosphoenolpyruvic acid to lactic acid with semiconductor quantum dots (QDs) confirms how enzyme cluster formation dictates the rate of coupled catalytic flux (kflux) across a series of differentially sized/shaped QDs and 2D nanoplatelets (NPLs). Enzyme kinetics and coupled flux were used to demonstrate that by mixing different NP systems into clusters, a >10× improvement in kflux is observed relative to free enzymes, which is also ≥2× greater than enhancement on individual NPs. Cluster formation was characterized with gel electrophoresis and transmission electron microscopy (TEM) imaging. The generalizability of this mixed-NP approach to improving flux is confirmed by application to a seven-enzyme system. This represents a powerful approach for accessing channeling with almost any choice of enzymes constituting a multienzyme cascade.

Keywords: CP: biotechnology; bionanotechnology; cascade; diffusion; enzyme; nanoparticle; quantum dot; substrate channeling; synthetic biology, biocatalysis.

MeSH terms

  • Kinetics
  • L-Lactate Dehydrogenase* / chemistry
  • L-Lactate Dehydrogenase* / metabolism
  • Lactic Acid* / chemistry
  • Lactic Acid* / metabolism
  • Nanoparticles* / chemistry
  • Phosphoenolpyruvate* / metabolism
  • Pyruvate Kinase* / chemistry
  • Pyruvate Kinase* / metabolism
  • Quantum Dots / chemistry