Designing Antitrypanosomal and Antileishmanial BODIPY Derivatives: A Computational and In Vitro Assessment

Molecules. 2024 Apr 30;29(9):2072. doi: 10.3390/molecules29092072.

Abstract

Leishmaniasis and Human African trypanosomiasis pose significant public health threats in resource-limited regions, accentuated by the drawbacks of the current antiprotozoal treatments and the lack of approved vaccines. Considering the demand for novel therapeutic drugs, a series of BODIPY derivatives with several functionalizations at the meso, 2 and/or 6 positions of the core were synthesized and characterized. The in vitro activity against Trypanosoma brucei and Leishmania major parasites was carried out alongside a human healthy cell line (MRC-5) to establish selectivity indices (SIs). Notably, the meso-substituted BODIPY, with 1-dimethylaminonaphthalene (1b) and anthracene moiety (1c), were the most active against L. major, displaying IC50 = 4.84 and 5.41 μM, with a 16 and 18-fold selectivity over MRC-5 cells, respectively. In contrast, the mono-formylated analogues 2b and 2c exhibited the highest toxicity (IC50 = 2.84 and 6.17 μM, respectively) and selectivity (SI = 24 and 11, respectively) against T. brucei. Further insights on the activity of these compounds were gathered from molecular docking studies. The results suggest that these BODIPYs act as competitive inhibitors targeting the NADPH/NADP+ linkage site of the pteridine reductase (PR) enzyme. Additionally, these findings unveil a range of quasi-degenerate binding complexes formed between the PRs and the investigated BODIPY derivatives. These results suggest a potential correlation between the anti-parasitic activity and the presence of multiple configurations that block the same site of the enzyme.

Keywords: BODIPY derivatives; Leishmania major; Trypanosoma brucei; antiprotozoal agent; molecular modeling.

MeSH terms

  • Antiprotozoal Agents* / chemical synthesis
  • Antiprotozoal Agents* / chemistry
  • Antiprotozoal Agents* / pharmacology
  • Boron Compounds* / chemical synthesis
  • Boron Compounds* / chemistry
  • Boron Compounds* / pharmacology
  • Cell Line
  • Drug Design
  • Humans
  • Leishmania major* / drug effects
  • Molecular Docking Simulation*
  • Molecular Structure
  • Oxidoreductases
  • Structure-Activity Relationship
  • Trypanocidal Agents / chemical synthesis
  • Trypanocidal Agents / chemistry
  • Trypanocidal Agents / pharmacology
  • Trypanosoma brucei brucei* / drug effects

Substances

  • Boron Compounds
  • 4,4-difluoro-4-bora-3a,4a-diaza-s-indacene
  • Antiprotozoal Agents
  • pteridine reductase
  • Trypanocidal Agents
  • Oxidoreductases

Grants and funding

This research was funded by Fundação para a Ciência e Tecnologia (FCT) and FEDER (European Fund for Regional Development)-COMPETE-QRENEU through the Chemistry Research Centre of the University of Minho (ref. CQ/UM (UID/QUI/00686/2020), a contract CEECINST/00156/2018/CP1642/CT0011, and a PhD grant of R.C.R. Gonçalves (SFRH/BD/05278/2020, https://doi.org/10.54499/2020.05278.BD). The NMR spectrometer Bruker Avance III 400 is part of the National NMR Network and was purchased within the framework of the National Program for Scientific Re-equipment, contract REDE/1517/RMN/2005 with funds from POCI 2010 (FEDER) and FCT.