The araBAD operon of Salmonella typhimurium LT2. II. Nucleotide sequence of araA and primary structure of its product, L-arabinose isomerase

Gene. 1985;34(1):123-8. doi: 10.1016/0378-1119(85)90302-6.

Abstract

The nucleotide sequence of gene araA of Salmonella typhimurium LT2 has been determined. The gene encodes an L-arabinose isomerase (EC 5.3.1.4) of 500 amino acid residues with a calculated Mr of 55814. The ATG start codon of araA is 10 bp distal to the TAA termination codon of araB. A presumed ribosome-binding site (RBS) "TAAGGA" 7 bp from the ATG codon overlaps the stop codon of araB. L-Arabinose isomerase was purified and the amino acid composition is in agreement with that predicted from the DNA sequence. The NH2-terminus of the protein is modified as the sequence cannot be analyzed by the automated Edman degradation. Amino acid composition analyses of both NH2-terminal and C-terminal cyanogen bromide (CNBr) cleaved peptides and partial amino acid sequence of the C-terminal peptide are consistent with the deduced amino acid sequence.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Aldose-Ketose Isomerases*
  • Amino Acid Sequence
  • Bacterial Proteins / genetics*
  • Bacterial Proteins / isolation & purification
  • Base Sequence
  • Carbohydrate Epimerases / genetics*
  • Carbohydrate Epimerases / isolation & purification
  • Cloning, Molecular
  • DNA, Bacterial / genetics
  • Escherichia coli / genetics
  • Genes
  • Genes, Bacterial
  • Operon
  • Salmonella typhimurium / genetics*

Substances

  • Bacterial Proteins
  • DNA, Bacterial
  • Carbohydrate Epimerases
  • Aldose-Ketose Isomerases
  • L-arabinose isomerase

Associated data

  • GENBANK/M11045
  • GENBANK/M11046
  • GENBANK/M11047