The capsid protein of Semliki Forest virus has clusters of basic amino acids and prolines in its amino-terminal region

Proc Natl Acad Sci U S A. 1980 Nov;77(11):6376-80. doi: 10.1073/pnas.77.11.6376.

Abstract

The amino acid sequence of the capsid (C) protein was deduced from the nucleotide sequence of the C gene. This part of the viral 42S RNA genome was transcribed into double-stranded cDNA. The cDNA was cloned in the Escherichia coli chi 1776-pBR322 host-vector system and then the base sequence was determined with the technique described by Maxam and Gilbert. The amino acid sequence of the C protein shows a clustering of basic amino acids and prolines within the first 110 amino acids.

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Capsid / analysis*
  • Capsid / metabolism
  • DNA, Viral / genetics
  • Genes, Viral
  • Proline
  • RNA, Viral / metabolism
  • Ribonucleoproteins / metabolism
  • Semliki forest virus / analysis*
  • Viral Proteins / analysis*

Substances

  • DNA, Viral
  • RNA, Viral
  • Ribonucleoproteins
  • Viral Proteins
  • Proline

Associated data

  • GENBANK/J02361
  • GENBANK/J02362
  • GENBANK/L00018
  • GENBANK/V01399
  • GENBANK/V01400
  • GENBANK/V01401
  • GENBANK/X04129