Evaluation of a novel serotyping system for hepatitis C virus: strong correlation with standard genotyping methodologies

J Clin Microbiol. 1995 Nov;33(11):2978-83. doi: 10.1128/jcm.33.11.2978-2983.1995.

Abstract

Direct sequencing and analysis of viral genomes are definitive methods for identifying various hepatitis C virus (HCV) genotypes. However, HCV genome sequencing methods are cumbersome and unsuitable for analyzing large numbers of clinical samples. We have developed a convenient, reliable, and reproducible RIBA strip immunoblot assay system for determining HCV serotype. Briefly, the assay consists of an immunoblot strip on which there are five lanes of immobilized serotype-specific HCV peptides from the nonstructural (NS-4) and core regions of the genomes of HCV types 1,2, and 3. HCV serotype is deduced by determining the greatest intensity of reactivity to the NS-4 serotype-specific HCV peptide band in relation to the intensity of the human immunoglobulin G internal control bands on each strip. HCV core peptide reactivity is used only in the absence of NS-4 reactivity. We used this assay to successfully serotype a high percentage of sera from well-documented HCV-infected patients. Our serotyping results correlated 99% with the findings from the standard restriction fragment length polymorphism genotyping methods. Less than 5% of the serum samples were untypeable. For a selected group of alpha interferon-treated patients we observed that the nonresponders (76.2%) and a majority of the responders who relapsed (72.2%) had type 2 HCV infection. A small population (n= 8) of complete responders was split 3:4:1 as type 1, type 2, and type 3, respectively. Our data indicate that this new serotyping assay has the potential to be a highly specific and reliable method for typing of HCV infection in patients.

Publication types

  • Comparative Study

MeSH terms

  • Genotype
  • Hepacivirus / classification*
  • Hepatitis C / drug therapy
  • Hepatitis C / virology
  • Hepatitis C Antigens*
  • Humans
  • Immunoblotting / methods*
  • Interferon-alpha / therapeutic use
  • Reagent Strips*
  • Reproducibility of Results
  • Serotyping / methods*

Substances

  • Hepatitis C Antigens
  • Interferon-alpha
  • Reagent Strips