Gingeras TR - Search Results

1

Flexible use of high-density oligonucleotide arrays for single-nucleotide polymorphism discovery and validation.

Dong S, Wang E, Hsie L, Cao Y, Chen X, Gingeras TR. Dong S, et al. Among authors: gingeras tr. Genome Res. 2001 Aug;11(8):1418-24. doi: 10.1101/gr.171101. Genome Res. 2001. PMID: 11483583 Free PMC article.

2

Simultaneous genotyping and species identification using hybridization pattern recognition analysis of generic Mycobacterium DNA arrays.

Gingeras TR, Ghandour G, Wang E, Berno A, Small PM, Drobniewski F, Alland D, Desmond E, Holodniy M, Drenkow J. Gingeras TR, et al. Genome Res. 1998 May;8(5):435-48. doi: 10.1101/gr.8.5.435. Genome Res. 1998. PMID: 9582189 Free article.

3

Examples of the complex architecture of the human transcriptome revealed by RACE and high-density tiling arrays.

Kapranov P, Drenkow J, Cheng J, Long J, Helt G, Dike S, Gingeras TR. Kapranov P, et al. Among authors: gingeras tr. Genome Res. 2005 Jul;15(7):987-97. doi: 10.1101/gr.3455305. Genome Res. 2005. PMID: 15998911 Free PMC article.

4

Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22.

Kampa D, Cheng J, Kapranov P, Yamanaka M, Brubaker S, Cawley S, Drenkow J, Piccolboni A, Bekiranov S, Helt G, Tammana H, Gingeras TR. Kampa D, et al. Among authors: gingeras tr. Genome Res. 2004 Mar;14(3):331-42. doi: 10.1101/gr.2094104. Genome Res. 2004. PMID: 14993201 Free PMC article.

5

Beyond expression profiling: next generation uses of high density oligonucleotide arrays.

Kapranov P, Sementchenko VI, Gingeras TR. Kapranov P, et al. Among authors: gingeras tr. Brief Funct Genomic Proteomic. 2003 Apr;2(1):47-56. doi: 10.1093/bfgp/2.1.47. Brief Funct Genomic Proteomic. 2003. PMID: 15239943 Review.

6

High density synthetic oligonucleotide arrays.

Lipshutz RJ, Fodor SP, Gingeras TR, Lockhart DJ. Lipshutz RJ, et al. Among authors: gingeras tr. Nat Genet. 1999 Jan;21(1 Suppl):20-4. doi: 10.1038/4447. Nat Genet. 1999. PMID: 9915496 Review.

7

Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets.

Johnson DS, Li W, Gordon DB, Bhattacharjee A, Curry B, Ghosh J, Brizuela L, Carroll JS, Brown M, Flicek P, Koch CM, Dunham I, Bieda M, Xu X, Farnham PJ, Kapranov P, Nix DA, Gingeras TR, Zhang X, Holster H, Jiang N, Green RD, Song JS, McCuine SA, Anton E, Nguyen L, Trinklein ND, Ye Z, Ching K, Hawkins D, Ren B, Scacheri PC, Rozowsky J, Karpikov A, Euskirchen G, Weissman S, Gerstein M, Snyder M, Yang A, Moqtaderi Z, Hirsch H, Shulha HP, Fu Y, Weng Z, Struhl K, Myers RM, Lieb JD, Liu XS. Johnson DS, et al. Among authors: gingeras tr. Genome Res. 2008 Mar;18(3):393-403. doi: 10.1101/gr.7080508. Epub 2008 Feb 7. Genome Res. 2008. PMID: 18258921 Free PMC article.

8

Detection of deleted genomic DNA using a semiautomated computational analysis of GeneChip data.

Salamon H, Kato-Maeda M, Small PM, Drenkow J, Gingeras TR. Salamon H, et al. Among authors: gingeras tr. Genome Res. 2000 Dec;10(12):2044-54. doi: 10.1101/gr.gr-1529r. Genome Res. 2000. PMID: 11116098 Free PMC article.

9

Comparing genomes within the species Mycobacterium tuberculosis.

Kato-Maeda M, Rhee JT, Gingeras TR, Salamon H, Drenkow J, Smittipat N, Small PM. Kato-Maeda M, et al. Among authors: gingeras tr. Genome Res. 2001 Apr;11(4):547-54. doi: 10.1101/gr.166401. Genome Res. 2001. PMID: 11282970 Free PMC article.

10

Analysis of drug pharmacology towards predicting drug behavior by expression profiling using high-density oligonucleotide arrays.

Hu JS, Durst M, Kerb R, Truong V, Ma JT, Khurgin E, Balaban D, Gingeras TR, Hoffman BB. Hu JS, et al. Among authors: gingeras tr. Ann N Y Acad Sci. 2000;919:9-15. doi: 10.1111/j.1749-6632.2000.tb06862.x. Ann N Y Acad Sci. 2000. PMID: 11083092

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