Stolovitzky GA - Search Results

1

Formation of regulatory patterns during signal propagation in a Mammalian cellular network.

Ma'ayan A, Jenkins SL, Neves S, Hasseldine A, Grace E, Dubin-Thaler B, Eungdamrong NJ, Weng G, Ram PT, Rice JJ, Kershenbaum A, Stolovitzky GA, Blitzer RD, Iyengar R. Ma'ayan A, et al. Among authors: stolovitzky ga. Science. 2005 Aug 12;309(5737):1078-83. doi: 10.1126/science.1108876. Science. 2005. PMID: 16099987 Free PMC article.

2

Ordered cyclic motifs contribute to dynamic stability in biological and engineered networks.

Ma'ayan A, Cecchi GA, Wagner J, Rao AR, Iyengar R, Stolovitzky G. Ma'ayan A, et al. Among authors: stolovitzky g. Proc Natl Acad Sci U S A. 2008 Dec 9;105(49):19235-40. doi: 10.1073/pnas.0805344105. Epub 2008 Nov 25. Proc Natl Acad Sci U S A. 2008. PMID: 19033453 Free PMC article.

3

A flexible ontology for inference of emergent whole cell function from relationships between subcellular processes.

Hansen J, Meretzky D, Woldesenbet S, Stolovitzky G, Iyengar R. Hansen J, et al. Sci Rep. 2017 Dec 18;7(1):17689. doi: 10.1038/s41598-017-16627-4. Sci Rep. 2017. PMID: 29255142 Free PMC article.

4

Reconstructing biological networks using conditional correlation analysis.

Rice JJ, Tu Y, Stolovitzky G. Rice JJ, et al. Bioinformatics. 2005 Mar;21(6):765-73. doi: 10.1093/bioinformatics/bti064. Epub 2004 Oct 14. Bioinformatics. 2005. PMID: 15486043

5

Lasting impressions: motifs in protein-protein maps may provide footprints of evolutionary events.

Rice JJ, Kershenbaum A, Stolovitzky G. Rice JJ, et al. Proc Natl Acad Sci U S A. 2005 Mar 1;102(9):3173-4. doi: 10.1073/pnas.0500130102. Epub 2005 Feb 22. Proc Natl Acad Sci U S A. 2005. PMID: 15728355 Free PMC article. No abstract available.

6

Genes@Work: an efficient algorithm for pattern discovery and multivariate feature selection in gene expression data.

Lepre J, Rice JJ, Tu Y, Stolovitzky G. Lepre J, et al. Bioinformatics. 2004 May 1;20(7):1033-44. doi: 10.1093/bioinformatics/bth035. Epub 2004 Feb 5. Bioinformatics. 2004. PMID: 14764572

7

A plausible model for the digital response of p53 to DNA damage.

Ma L, Wagner J, Rice JJ, Hu W, Levine AJ, Stolovitzky GA. Ma L, et al. Among authors: stolovitzky ga. Proc Natl Acad Sci U S A. 2005 Oct 4;102(40):14266-71. doi: 10.1073/pnas.0501352102. Epub 2005 Sep 26. Proc Natl Acad Sci U S A. 2005. PMID: 16186499 Free PMC article.

8

p53-Mdm2 loop controlled by a balance of its feedback strength and effective dampening using ATM and delayed feedback.

Wagner J, Ma L, Rice JJ, Hu W, Levine AJ, Stolovitzky GA. Wagner J, et al. Among authors: stolovitzky ga. Syst Biol (Stevenage). 2005 Sep;152(3):109-18. doi: 10.1049/ip-syb:20050025. Syst Biol (Stevenage). 2005. PMID: 16986275

9

Ising model of cardiac thin filament activation with nearest-neighbor cooperative interactions.

Rice JJ, Stolovitzky G, Tu Y, de Tombe PP. Rice JJ, et al. Biophys J. 2003 Feb;84(2 Pt 1):897-909. doi: 10.1016/S0006-3495(03)74907-8. Biophys J. 2003. PMID: 12547772 Free PMC article.

10

The self-assessment trap: can we all be better than average?

Norel R, Rice JJ, Stolovitzky G. Norel R, et al. Mol Syst Biol. 2011 Oct 11;7:537. doi: 10.1038/msb.2011.70. Mol Syst Biol. 2011. PMID: 21988833 Free PMC article. No abstract available.

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