Blencowe BJ - Search Results

1

A systematic analysis of intronic sequences downstream of 5' splice sites reveals a widespread role for U-rich motifs and TIA1/TIAL1 proteins in alternative splicing regulation.

Aznarez I, Barash Y, Shai O, He D, Zielenski J, Tsui LC, Parkinson J, Frey BJ, Rommens JM, Blencowe BJ. Aznarez I, et al. Among authors: blencowe bj. Genome Res. 2008 Aug;18(8):1247-58. doi: 10.1101/gr.073155.107. Epub 2008 May 2. Genome Res. 2008. PMID: 18456862 Free PMC article.

2

Characterization of disease-associated mutations affecting an exonic splicing enhancer and two cryptic splice sites in exon 13 of the cystic fibrosis transmembrane conductance regulator gene.

Aznarez I, Chan EM, Zielenski J, Blencowe BJ, Tsui LC. Aznarez I, et al. Among authors: blencowe bj. Hum Mol Genet. 2003 Aug 15;12(16):2031-40. doi: 10.1093/hmg/ddg215. Hum Mol Genet. 2003. PMID: 12913074

3

The functional landscape of mouse gene expression.

Zhang W, Morris QD, Chang R, Shai O, Bakowski MA, Mitsakakis N, Mohammad N, Robinson MD, Zirngibl R, Somogyi E, Laurin N, Eftekharpour E, Sat E, Grigull J, Pan Q, Peng WT, Krogan N, Greenblatt J, Fehlings M, van der Kooy D, Aubin J, Bruneau BG, Rossant J, Blencowe BJ, Frey BJ, Hughes TR. Zhang W, et al. Among authors: blencowe bj. J Biol. 2004;3(5):21. doi: 10.1186/jbiol16. Epub 2004 Dec 6. J Biol. 2004. PMID: 15588312 Free PMC article.

4

Revealing global regulatory features of mammalian alternative splicing using a quantitative microarray platform.

Pan Q, Shai O, Misquitta C, Zhang W, Saltzman AL, Mohammad N, Babak T, Siu H, Hughes TR, Morris QD, Frey BJ, Blencowe BJ. Pan Q, et al. Among authors: blencowe bj. Mol Cell. 2004 Dec 22;16(6):929-41. doi: 10.1016/j.molcel.2004.12.004. Mol Cell. 2004. PMID: 15610736 Free article.

5

Alternative splicing of conserved exons is frequently species-specific in human and mouse.

Pan Q, Bakowski MA, Morris Q, Zhang W, Frey BJ, Hughes TR, Blencowe BJ. Pan Q, et al. Among authors: blencowe bj. Trends Genet. 2005 Feb;21(2):73-7. doi: 10.1016/j.tig.2004.12.004. Trends Genet. 2005. PMID: 15661351

6

Genome-wide analysis of mouse transcripts using exon microarrays and factor graphs.

Frey BJ, Mohammad N, Morris QD, Zhang W, Robinson MD, Mnaimneh S, Chang R, Pan Q, Sat E, Rossant J, Bruneau BG, Aubin JE, Blencowe BJ, Hughes TR. Frey BJ, et al. Among authors: blencowe bj. Nat Genet. 2005 Sep;37(9):991-6. doi: 10.1038/ng1630. Epub 2005 Aug 28. Nat Genet. 2005. PMID: 16127451

7

Inferring global levels of alternative splicing isoforms using a generative model of microarray data.

Shai O, Morris QD, Blencowe BJ, Frey BJ. Shai O, et al. Among authors: blencowe bj. Bioinformatics. 2006 Mar 1;22(5):606-13. doi: 10.1093/bioinformatics/btk028. Epub 2006 Jan 10. Bioinformatics. 2006. PMID: 16403798

8

Quantitative microarray profiling provides evidence against widespread coupling of alternative splicing with nonsense-mediated mRNA decay to control gene expression.

Pan Q, Saltzman AL, Kim YK, Misquitta C, Shai O, Maquat LE, Frey BJ, Blencowe BJ. Pan Q, et al. Among authors: blencowe bj. Genes Dev. 2006 Jan 15;20(2):153-8. doi: 10.1101/gad.1382806. Genes Dev. 2006. PMID: 16418482 Free PMC article.

9

Global analysis of alternative splicing during T-cell activation.

Ip JY, Tong A, Pan Q, Topp JD, Blencowe BJ, Lynch KW. Ip JY, et al. Among authors: blencowe bj. RNA. 2007 Apr;13(4):563-72. doi: 10.1261/rna.457207. Epub 2007 Feb 16. RNA. 2007. PMID: 17307815 Free PMC article.

10

Exon skipping through the creation of a putative exonic splicing silencer as a consequence of the cystic fibrosis mutation R553X.

Aznarez I, Zielenski J, Rommens JM, Blencowe BJ, Tsui LC. Aznarez I, et al. Among authors: blencowe bj. J Med Genet. 2007 May;44(5):341-6. doi: 10.1136/jmg.2006.045880. J Med Genet. 2007. PMID: 17475917 Free PMC article.

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