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Genomewide analysis of aryl hydrocarbon receptor binding targets reveals an extensive array of gene clusters that control morphogenetic and developmental programs.
Sartor MA, Schnekenburger M, Marlowe JL, Reichard JF, Wang Y, Fan Y, Ma C, Karyala S, Halbleib D, Liu X, Medvedovic M, Puga A. Sartor MA, et al. Among authors: wang y. Environ Health Perspect. 2009 Jul;117(7):1139-46. doi: 10.1289/ehp.0800485. Epub 2009 Mar 24. Environ Health Perspect. 2009. PMID: 19654925 Free PMC article.
Xenbase: deep integration of GEO & SRA RNA-seq and ChIP-seq data in a model organism database.
Fortriede JD, Pells TJ, Chu S, Chaturvedi P, Wang D, Fisher ME, James-Zorn C, Wang Y, Nenni MJ, Burns KA, Lotay VS, Ponferrada VG, Karimi K, Zorn AM, Vize PD. Fortriede JD, et al. Among authors: wang y, wang d. Nucleic Acids Res. 2020 Jan 8;48(D1):D776-D782. doi: 10.1093/nar/gkz933. Nucleic Acids Res. 2020. PMID: 31733057 Free PMC article.
Xenbase: a genomic, epigenomic and transcriptomic model organism database.
Karimi K, Fortriede JD, Lotay VS, Burns KA, Wang DZ, Fisher ME, Pells TJ, James-Zorn C, Wang Y, Ponferrada VG, Chu S, Chaturvedi P, Zorn AM, Vize PD. Karimi K, et al. Among authors: wang y, wang dz. Nucleic Acids Res. 2018 Jan 4;46(D1):D861-D868. doi: 10.1093/nar/gkx936. Nucleic Acids Res. 2018. PMID: 29059324 Free PMC article.
Navigating Xenbase: An Integrated Xenopus Genomics and Gene Expression Database.
James-Zorn C, Ponferrada V, Fisher ME, Burns K, Fortriede J, Segerdell E, Karimi K, Lotay V, Wang DZ, Chu S, Pells T, Wang Y, Vize PD, Zorn A. James-Zorn C, et al. Among authors: wang y, wang dz. Methods Mol Biol. 2018;1757:251-305. doi: 10.1007/978-1-4939-7737-6_10. Methods Mol Biol. 2018. PMID: 29761462 Free PMC article.
Xenbase: Facilitating the Use of Xenopus to Model Human Disease.
Nenni MJ, Fisher ME, James-Zorn C, Pells TJ, Ponferrada V, Chu S, Fortriede JD, Burns KA, Wang Y, Lotay VS, Wang DZ, Segerdell E, Chaturvedi P, Karimi K, Vize PD, Zorn AM. Nenni MJ, et al. Among authors: wang y, wang dz. Front Physiol. 2019 Feb 26;10:154. doi: 10.3389/fphys.2019.00154. eCollection 2019. Front Physiol. 2019. PMID: 30863320 Free PMC article. Review.
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