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Characterization of human immunodeficiency virus type 1 populations containing CXCR4-using variants from recently infected individuals.
Huang W, Toma J, Stawiski E, Fransen S, Wrin T, Parkin N, Whitcomb JM, Coakley E, Hecht FM, Deeks SG, Gandhi RT, Eshleman SH, Petropoulos CJ. Huang W, et al. Among authors: coakley e. AIDS Res Hum Retroviruses. 2009 Aug;25(8):795-802. doi: 10.1089/aid.2008.0252. AIDS Res Hum Retroviruses. 2009. PMID: 19678765 Free PMC article.
Assessing chemokine co-receptor usage in HIV.
Coakley E, Petropoulos CJ, Whitcomb JM. Coakley E, et al. Curr Opin Infect Dis. 2005 Feb;18(1):9-15. doi: 10.1097/00001432-200502000-00003. Curr Opin Infect Dis. 2005. PMID: 15647694 Review.
A case-based reasoning system for genotypic prediction of HIV-1 co-receptor tropism.
Evans MC, Paquet AC, Huang W, Napolitano L, Frantzell A, Toma J, Stawiski EW, Goetz MB, Petropoulos CJ, Whitcomb J, Coakley E, Haddad M. Evans MC, et al. Among authors: coakley e. J Bioinform Comput Biol. 2013 Aug;11(4):1350006. doi: 10.1142/S0219720013500066. Epub 2013 Apr 7. J Bioinform Comput Biol. 2013. PMID: 23859270
Baseline HIV type 1 coreceptor tropism predicts disease progression.
Daar ES, Kesler KL, Petropoulos CJ, Huang W, Bates M, Lail AE, Coakley EP, Gomperts ED, Donfield SM; Hemophilia Growth and Development Study. Daar ES, et al. Among authors: coakley ep. Clin Infect Dis. 2007 Sep 1;45(5):643-9. doi: 10.1086/520650. Epub 2007 Jul 20. Clin Infect Dis. 2007. PMID: 17683002
Connection domain mutations in HIV-1 reverse transcriptase do not impact etravirine susceptibility and virologic responses to etravirine-containing regimens.
Gupta S, Vingerhoets J, Fransen S, Tambuyzer L, Azijn H, Frantzell A, Paredes R, Coakley E, Nijs S, Clotet B, Petropoulos CJ, Schapiro J, Huang W, Picchio G. Gupta S, et al. Among authors: coakley e. Antimicrob Agents Chemother. 2011 Jun;55(6):2872-9. doi: 10.1128/AAC.01695-10. Epub 2011 Apr 4. Antimicrob Agents Chemother. 2011. PMID: 21464253 Free PMC article.
Antiretroviral Activity of AMD11070 (An Orally Administered CXCR4 Entry Inhibitor): Results of NIH/NIAID AIDS Clinical Trials Group Protocol A5210.
Johnson VA, Cramer YS, Rosenkranz SL, Becker S, Klingman KL, Kallungal B, Coakley E, Acosta EP, Calandra G, Saag MS; NIH/NIAID AIDS Clinical Trials Group A5210 Protocol Team. Johnson VA, et al. Among authors: coakley e. AIDS Res Hum Retroviruses. 2019 Aug;35(8):691-697. doi: 10.1089/AID.2018.0256. Epub 2019 Jun 18. AIDS Res Hum Retroviruses. 2019. PMID: 31099252 Free PMC article. Clinical Trial.
The probable source of both the primary multidrug-resistant (MDR) HIV-1 strain found in a patient with rapid progression to AIDS and a second recombinant MDR strain found in a chronically HIV-1-infected patient.
Blick G, Kagan RM, Coakley E, Petropoulos C, Maroldo L, Greiger-Zanlungo P, Gretz S, Garton T. Blick G, et al. Among authors: coakley e. J Infect Dis. 2007 May 1;195(9):1250-9. doi: 10.1086/512240. Epub 2007 Mar 21. J Infect Dis. 2007. PMID: 17396993
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