Ma'ayan A - Search Results

1

Lists2Networks: integrated analysis of gene/protein lists.

Lachmann A, Ma'ayan A. Lachmann A, et al. BMC Bioinformatics. 2010 Feb 12;11:87. doi: 10.1186/1471-2105-11-87. BMC Bioinformatics. 2010. PMID: 20152038 Free PMC article.

2

Network analysis of FDA approved drugs and their targets.

Ma'ayan A, Jenkins SL, Goldfarb J, Iyengar R. Ma'ayan A, et al. Mt Sinai J Med. 2007 Apr;74(1):27-32. doi: 10.1002/msj.20002. Mt Sinai J Med. 2007. PMID: 17516560 Free PMC article.

3

AVIS: AJAX viewer of interactive signaling networks.

Berger SI, Iyengar R, Ma'ayan A. Berger SI, et al. Bioinformatics. 2007 Oct 15;23(20):2803-5. doi: 10.1093/bioinformatics/btm444. Epub 2007 Sep 12. Bioinformatics. 2007. PMID: 17855420 Free PMC article.

4

Genes2Networks: connecting lists of gene symbols using mammalian protein interactions databases.

Berger SI, Posner JM, Ma'ayan A. Berger SI, et al. BMC Bioinformatics. 2007 Oct 4;8:372. doi: 10.1186/1471-2105-8-372. BMC Bioinformatics. 2007. PMID: 17916244 Free PMC article.

5

Network integration and graph analysis in mammalian molecular systems biology.

Ma'ayan A. Ma'ayan A. IET Syst Biol. 2008 Sep;2(5):206-21. doi: 10.1049/iet-syb:20070075. IET Syst Biol. 2008. PMID: 19045817 Free PMC article. Review.

6

SNAVI: Desktop application for analysis and visualization of large-scale signaling networks.

Ma'ayan A, Jenkins SL, Webb RL, Berger SI, Purushothaman SP, Abul-Husn NS, Posner JM, Flores T, Iyengar R. Ma'ayan A, et al. BMC Syst Biol. 2009 Jan 20;3:10. doi: 10.1186/1752-0509-3-10. BMC Syst Biol. 2009. PMID: 19154595 Free PMC article.

7

KEA: kinase enrichment analysis.

Lachmann A, Ma'ayan A. Lachmann A, et al. Bioinformatics. 2009 Mar 1;25(5):684-6. doi: 10.1093/bioinformatics/btp026. Epub 2009 Jan 28. Bioinformatics. 2009. PMID: 19176546 Free PMC article.

8

GATE: software for the analysis and visualization of high-dimensional time series expression data.

MacArthur BD, Lachmann A, Lemischka IR, Ma'ayan A. MacArthur BD, et al. Bioinformatics. 2010 Jan 1;26(1):143-4. doi: 10.1093/bioinformatics/btp628. Epub 2009 Nov 5. Bioinformatics. 2010. PMID: 19892805 Free PMC article.

9

Systems-level dynamic analyses of fate change in murine embryonic stem cells.

Lu R, Markowetz F, Unwin RD, Leek JT, Airoldi EM, MacArthur BD, Lachmann A, Rozov R, Ma'ayan A, Boyer LA, Troyanskaya OG, Whetton AD, Lemischka IR. Lu R, et al. Nature. 2009 Nov 19;462(7271):358-62. doi: 10.1038/nature08575. Nature. 2009. PMID: 19924215 Free PMC article.

10

Global phosphorylation analysis of beta-arrestin-mediated signaling downstream of a seven transmembrane receptor (7TMR).

Xiao K, Sun J, Kim J, Rajagopal S, Zhai B, Villén J, Haas W, Kovacs JJ, Shukla AK, Hara MR, Hernandez M, Lachmann A, Zhao S, Lin Y, Cheng Y, Mizuno K, Ma'ayan A, Gygi SP, Lefkowitz RJ. Xiao K, et al. Proc Natl Acad Sci U S A. 2010 Aug 24;107(34):15299-304. doi: 10.1073/pnas.1008461107. Epub 2010 Aug 4. Proc Natl Acad Sci U S A. 2010. PMID: 20686112 Free PMC article.

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