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Arcadia: a visualization tool for metabolic pathways.
Villéger AC, Pettifer SR, Kell DB. Villéger AC, et al. Among authors: kell db. Bioinformatics. 2010 Jun 1;26(11):1470-1. doi: 10.1093/bioinformatics/btq154. Epub 2010 May 7. Bioinformatics. 2010. PMID: 20453003 Free PMC article.
Utopia documents: linking scholarly literature with research data.
Attwood TK, Kell DB, McDermott P, Marsh J, Pettifer SR, Thorne D. Attwood TK, et al. Among authors: kell db. Bioinformatics. 2010 Sep 15;26(18):i568-74. doi: 10.1093/bioinformatics/btq383. Bioinformatics. 2010. PMID: 20823323 Free PMC article.
The Systems Biology Graphical Notation.
Le Novère N, Hucka M, Mi H, Moodie S, Schreiber F, Sorokin A, Demir E, Wegner K, Aladjem MI, Wimalaratne SM, Bergman FT, Gauges R, Ghazal P, Kawaji H, Li L, Matsuoka Y, Villéger A, Boyd SE, Calzone L, Courtot M, Dogrusoz U, Freeman TC, Funahashi A, Ghosh S, Jouraku A, Kim S, Kolpakov F, Luna A, Sahle S, Schmidt E, Watterson S, Wu G, Goryanin I, Kell DB, Sander C, Sauro H, Snoep JL, Kohn K, Kitano H. Le Novère N, et al. Among authors: kell db. Nat Biotechnol. 2009 Aug;27(8):735-41. doi: 10.1038/nbt.1558. Epub 2009 Aug 7. Nat Biotechnol. 2009. PMID: 19668183 Free article.
Selenzyme: enzyme selection tool for pathway design.
Carbonell P, Wong J, Swainston N, Takano E, Turner NJ, Scrutton NS, Kell DB, Breitling R, Faulon JL. Carbonell P, et al. Among authors: kell db. Bioinformatics. 2018 Jun 15;34(12):2153-2154. doi: 10.1093/bioinformatics/bty065. Bioinformatics. 2018. PMID: 29425325 Free PMC article.
A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology.
Herrgård MJ, Swainston N, Dobson P, Dunn WB, Arga KY, Arvas M, Blüthgen N, Borger S, Costenoble R, Heinemann M, Hucka M, Le Novère N, Li P, Liebermeister W, Mo ML, Oliveira AP, Petranovic D, Pettifer S, Simeonidis E, Smallbone K, Spasić I, Weichart D, Brent R, Broomhead DS, Westerhoff HV, Kirdar B, Penttilä M, Klipp E, Palsson BØ, Sauer U, Oliver SG, Mendes P, Nielsen J, Kell DB. Herrgård MJ, et al. Among authors: kell db. Nat Biotechnol. 2008 Oct;26(10):1155-60. doi: 10.1038/nbt1492. Nat Biotechnol. 2008. PMID: 18846089 Free PMC article.
Controlled vocabularies and semantics in systems biology.
Courtot M, Juty N, Knüpfer C, Waltemath D, Zhukova A, Dräger A, Dumontier M, Finney A, Golebiewski M, Hastings J, Hoops S, Keating S, Kell DB, Kerrien S, Lawson J, Lister A, Lu J, Machne R, Mendes P, Pocock M, Rodriguez N, Villeger A, Wilkinson DJ, Wimalaratne S, Laibe C, Hucka M, Le Novère N. Courtot M, et al. Among authors: kell db. Mol Syst Biol. 2011 Oct 25;7:543. doi: 10.1038/msb.2011.77. Mol Syst Biol. 2011. PMID: 22027554 Free PMC article.
410 results