Tom E - Search Results

1

Molecular classification of thyroid nodules using high-dimensionality genomic data.

Chudova D, Wilde JI, Wang ET, Wang H, Rabbee N, Egidio CM, Reynolds J, Tom E, Pagan M, Rigl CT, Friedman L, Wang CC, Lanman RB, Zeiger M, Kebebew E, Rosai J, Fellegara G, LiVolsi VA, Kennedy GC. Chudova D, et al. Among authors: tom e. J Clin Endocrinol Metab. 2010 Dec;95(12):5296-304. doi: 10.1210/jc.2010-1087. Epub 2010 Sep 8. J Clin Endocrinol Metab. 2010. PMID: 20826580

2

Analytical performance verification of a molecular diagnostic for cytology-indeterminate thyroid nodules.

Walsh PS, Wilde JI, Tom EY, Reynolds JD, Chen DC, Chudova DI, Pagan M, Pankratz DG, Wong M, Veitch J, Friedman L, Monroe R, Steward DL, Lupo MA, Lanman RB, Kennedy GC. Walsh PS, et al. J Clin Endocrinol Metab. 2012 Dec;97(12):E2297-306. doi: 10.1210/jc.2012-1923. Epub 2012 Oct 18. J Clin Endocrinol Metab. 2012. PMID: 23087323

3

Does addition of BRAF V600E mutation testing modify sensitivity or specificity of the Afirma Gene Expression Classifier in cytologically indeterminate thyroid nodules?

Kloos RT, Reynolds JD, Walsh PS, Wilde JI, Tom EY, Pagan M, Barbacioru C, Chudova DI, Wong M, Friedman L, LiVolsi VA, Rosai J, Lanman RB, Kennedy GC. Kloos RT, et al. J Clin Endocrinol Metab. 2013 Apr;98(4):E761-8. doi: 10.1210/jc.2012-3762. Epub 2013 Mar 8. J Clin Endocrinol Metab. 2013. PMID: 23476074

4

Machine learning from concept to clinic: reliable detection of BRAF V600E DNA mutations in thyroid nodules using high-dimensional RNA expression data.

Diggans J, Kim SY, Hu Z, Pankratz D, Wong M, Reynolds J, Tom E, Pagan M, Monroe R, Rosai J, Livolsi VA, Lanman RB, Kloos RT, Walsh PS, Kennedy GC. Diggans J, et al. Among authors: tom e. Pac Symp Biocomput. 2015:371-82. Pac Symp Biocomput. 2015. PMID: 25592597 Free article.

5

The diagnostic application of RNA sequencing in patients with thyroid cancer: an analysis of 851 variants and 133 fusions in 524 genes.

Pagan M, Kloos RT, Lin CF, Travers KJ, Matsuzaki H, Tom EY, Kim SY, Wong MG, Stewart AC, Huang J, Walsh PS, Monroe RJ, Kennedy GC. Pagan M, et al. BMC Bioinformatics. 2016 Jan 11;17 Suppl 1(Suppl 1):6. doi: 10.1186/s12859-015-0849-9. BMC Bioinformatics. 2016. PMID: 26818556 Free PMC article.

6

Analytical performance of Envisia: a genomic classifier for usual interstitial pneumonia.

Choi Y, Lu J, Hu Z, Pankratz DG, Jiang H, Cao M, Marchisano C, Huiras J, Fedorowicz G, Wong MG, Anderson JR, Tom EY, Babiarz J, Imtiaz U, Barth NM, Walsh PS, Kennedy GC, Huang J. Choi Y, et al. BMC Pulm Med. 2017 Nov 17;17(1):141. doi: 10.1186/s12890-017-0485-4. BMC Pulm Med. 2017. PMID: 29149880 Free PMC article.

7

Classification of usual interstitial pneumonia in patients with interstitial lung disease: assessment of a machine learning approach using high-dimensional transcriptional data.

Kim SY, Diggans J, Pankratz D, Huang J, Pagan M, Sindy N, Tom E, Anderson J, Choi Y, Lynch DA, Steele MP, Flaherty KR, Brown KK, Farah H, Bukstein MJ, Pardo A, Selman M, Wolters PJ, Nathan SD, Colby TV, Myers JL, Katzenstein AL, Raghu G, Kennedy GC. Kim SY, et al. Among authors: tom e. Lancet Respir Med. 2015 Jun;3(6):473-82. doi: 10.1016/S2213-2600(15)00140-X. Epub 2015 May 20. Lancet Respir Med. 2015. PMID: 26003389

8

Gene expression patterns in livers of Hispanic patients infected with hepatitis C virus.

Hevezi PA, Tom E, Wilson K, Lambert P, Gutierrez-Reyes G, Kershenobich D, Zlotnik A. Hevezi PA, et al. Among authors: tom e. Autoimmunity. 2011 Nov;44(7):532-42. doi: 10.3109/08916934.2011.592881. Epub 2011 Aug 24. Autoimmunity. 2011. PMID: 21864061

9

A novel quantification method for retinal pigment epithelium phagocytosis using a very-long-chain polyunsaturated fatty acids-based strategy.

Gao F, Tom E, Lieffrig SA, Finnemann SC, Skowronska-Krawczyk D. Gao F, et al. Among authors: tom e. Front Mol Neurosci. 2023 Oct 20;16:1279457. doi: 10.3389/fnmol.2023.1279457. eCollection 2023. Front Mol Neurosci. 2023. PMID: 37928068 Free PMC article.

10

Upregulation of Nox4 induces a pro-survival Nrf2 response in cancer-associated fibroblasts that promotes tumorigenesis and metastasis, in part via Birc5 induction.

Mir S, Golden BDO, Griess BJ, Vengoji R, Tom E, Kosmacek EA, Oberley-Deegan RE, Talmon GA, Band V, Teoh-Fitzgerald ML. Mir S, et al. Among authors: tom e. Breast Cancer Res. 2022 Jul 14;24(1):48. doi: 10.1186/s13058-022-01548-6. Breast Cancer Res. 2022. PMID: 35836253 Free PMC article.

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