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Deep sequencing reveals mixed infection with 2009 pandemic influenza A (H1N1) virus strains and the emergence of oseltamivir resistance.
Ghedin E, Laplante J, DePasse J, Wentworth DE, Santos RP, Lepow ML, Porter J, Stellrecht K, Lin X, Operario D, Griesemer S, Fitch A, Halpin RA, Stockwell TB, Spiro DJ, Holmes EC, St George K. Ghedin E, et al. Among authors: halpin ra. J Infect Dis. 2011 Jan 15;203(2):168-74. doi: 10.1093/infdis/jiq040. J Infect Dis. 2011. PMID: 21288815 Free PMC article.
Mixed infection and the genesis of influenza virus diversity.
Ghedin E, Fitch A, Boyne A, Griesemer S, DePasse J, Bera J, Zhang X, Halpin RA, Smit M, Jennings L, St George K, Holmes EC, Spiro DJ. Ghedin E, et al. Among authors: halpin ra. J Virol. 2009 Sep;83(17):8832-41. doi: 10.1128/JVI.00773-09. Epub 2009 Jun 24. J Virol. 2009. PMID: 19553313 Free PMC article.
Unseasonal transmission of H3N2 influenza A virus during the swine-origin H1N1 pandemic.
Ghedin E, Wentworth DE, Halpin RA, Lin X, Bera J, DePasse J, Fitch A, Griesemer S, Hine E, Katzel DA, Overton L, Proudfoot K, Sitz J, Szczypinski B, StGeorge K, Spiro DJ, Holmes EC. Ghedin E, et al. Among authors: halpin ra. J Virol. 2010 Jun;84(11):5715-8. doi: 10.1128/JVI.00018-10. Epub 2010 Mar 17. J Virol. 2010. PMID: 20237080 Free PMC article.
Extensive geographical mixing of 2009 human H1N1 influenza A virus in a single university community.
Holmes EC, Ghedin E, Halpin RA, Stockwell TB, Zhang XQ, Fleming R, Davey R, Benson CA, Mehta S, Taplitz R, Liu YT, Brouwer KC, Wentworth DE, Lin X, Schooley RT; INSIGHT FLU002 Study Group. Holmes EC, et al. Among authors: halpin ra. J Virol. 2011 Jul;85(14):6923-9. doi: 10.1128/JVI.00438-11. Epub 2011 May 18. J Virol. 2011. PMID: 21593168 Free PMC article.
Sequence analysis of in vivo defective interfering-like RNA of influenza A H1N1 pandemic virus.
Saira K, Lin X, DePasse JV, Halpin R, Twaddle A, Stockwell T, Angus B, Cozzi-Lepri A, Delfino M, Dugan V, Dwyer DE, Freiberg M, Horban A, Losso M, Lynfield R, Wentworth DN, Holmes EC, Davey R, Wentworth DE, Ghedin E; INSIGHT FLU002 Study Group; INSIGHT FLU003 Study Group. Saira K, et al. J Virol. 2013 Jul;87(14):8064-74. doi: 10.1128/JVI.00240-13. Epub 2013 May 15. J Virol. 2013. PMID: 23678180 Free PMC article.
Genomic reassortment of influenza A virus in North American swine, 1998-2011.
Nelson MI, Detmer SE, Wentworth DE, Tan Y, Schwartzbard A, Halpin RA, Stockwell TB, Lin X, Vincent AL, Gramer MR, Holmes EC. Nelson MI, et al. Among authors: halpin ra. J Gen Virol. 2012 Dec;93(Pt 12):2584-2589. doi: 10.1099/vir.0.045930-0. Epub 2012 Sep 19. J Gen Virol. 2012. PMID: 22993190 Free PMC article.
Equine influenza A(H3N8) virus isolated from Bactrian camel, Mongolia.
Yondon M, Zayat B, Nelson MI, Heil GL, Anderson BD, Lin X, Halpin RA, McKenzie PP, White SK, Wentworth DE, Gray GC. Yondon M, et al. Among authors: halpin ra. Emerg Infect Dis. 2014 Dec;20(12):2144-7. doi: 10.3201/eid2012.140435. Emerg Infect Dis. 2014. PMID: 25418532 Free PMC article.
Phylogeography of Influenza A(H3N2) Virus in Peru, 2010-2012.
Pollett S, Nelson MI, Kasper M, Tinoco Y, Simons M, Romero C, Silva M, Lin X, Halpin RA, Fedorova N, Stockwell TB, Wentworth D, Holmes EC, Bausch DG. Pollett S, et al. Among authors: halpin ra. Emerg Infect Dis. 2015 Aug;21(8):1330-8. doi: 10.3201/eid2108.150084. Emerg Infect Dis. 2015. PMID: 26196599 Free PMC article.
Quantifying influenza virus diversity and transmission in humans.
Poon LL, Song T, Rosenfeld R, Lin X, Rogers MB, Zhou B, Sebra R, Halpin RA, Guan Y, Twaddle A, DePasse JV, Stockwell TB, Wentworth DE, Holmes EC, Greenbaum B, Peiris JS, Cowling BJ, Ghedin E. Poon LL, et al. Among authors: halpin ra. Nat Genet. 2016 Feb;48(2):195-200. doi: 10.1038/ng.3479. Epub 2016 Jan 4. Nat Genet. 2016. PMID: 26727660 Free PMC article.
123 results